The 2.0 version of rSNPBase

Variant report

Variant rs2100395
Chromosome Location chr2:178277703-178277704
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178258800-178285000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr2:178258800-178294200 Weak transcription Thymus Thymus
3 chr2:178260200-178280200 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr2:178260400-178285600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:178262800-178279200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:178263400-178291800 Weak transcription Duodenum Mucosa Duodenum
7 chr2:178264200-178282800 Weak transcription Dnd41 blood
8 chr2:178264200-178291600 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:178264400-178280400 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr2:178265600-178287000 Weak transcription K562 blood
11 chr2:178266000-178280200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr2:178268800-178278000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr2:178269000-178278200 Weak transcription A549 lung
14 chr2:178269200-178283000 Weak transcription HSMM muscle
15 chr2:178269200-178283000 Weak transcription Osteobl bone
16 chr2:178270000-178280200 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr2:178270200-178278200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr2:178270200-178280800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr2:178270400-178281000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr2:178270400-178281000 Weak transcription Brain Hippocampus Middle brain
21 chr2:178270400-178294400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:178270800-178277800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:178271800-178291600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr2:178272400-178285600 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr2:178272800-178295200 Weak transcription Left Ventricle heart
26 chr2:178273000-178288800 Weak transcription GM12878-XiMat blood
27 chr2:178273400-178286600 Weak transcription HSMMtube muscle
28 chr2:178273400-178288600 Weak transcription Primary T cells from cord blood blood
29 chr2:178274400-178282800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr2:178274600-178279800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr2:178274600-178280000 Weak transcription Small Intestine intestine
32 chr2:178274600-178280400 Weak transcription Fetal Intestine Small intestine
33 chr2:178274600-178291800 Weak transcription Primary B cells from cord blood blood
34 chr2:178276000-178277800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:178276000-178278000 Weak transcription HepG2 liver
36 chr2:178276400-178291400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:178276800-178279800 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr2:178276800-178289800 Weak transcription Fetal Intestine Large intestine
39 chr2:178276800-178294400 Weak transcription Psoas Muscle Psoas
40 chr2:178277000-178277800 Strong transcription Fetal Stomach stomach
41 chr2:178277200-178278000 Enhancers Right Ventricle heart
42 chr2:178277400-178291800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr2:178277600-178278000 Strong transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015