Variant report
| Variant | rs12990729 |
|---|---|
| Chromosome Location | chr2:178309007-178309008 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:178287200-178310600 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr2:178287600-178314200 | Weak transcription | Gastric | stomach |
| 3 | chr2:178295400-178329800 | Weak transcription | Pancreas | Pancrea |
| 4 | chr2:178295400-178330000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 5 | chr2:178295400-178330200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr2:178296400-178397000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 7 | chr2:178296600-178319800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr2:178296800-178310000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 9 | chr2:178297000-178313400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 10 | chr2:178297200-178315400 | Strong transcription | HepG2 | liver |
| 11 | chr2:178297800-178312800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 12 | chr2:178297800-178314200 | Weak transcription | Fetal Stomach | stomach |
| 13 | chr2:178297800-178319600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr2:178297800-178329800 | Weak transcription | Ovary | ovary |
| 15 | chr2:178298400-178309800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 16 | chr2:178298400-178314200 | Weak transcription | Left Ventricle | heart |
| 17 | chr2:178298800-178309600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 18 | chr2:178298800-178312600 | Weak transcription | HSMMtube | muscle |
| 19 | chr2:178298800-178313600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 20 | chr2:178298800-178313800 | Strong transcription | Dnd41 | blood |
| 21 | chr2:178298800-178314000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 22 | chr2:178298800-178314000 | Weak transcription | Fetal Intestine Small | intestine |
| 23 | chr2:178298800-178329200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 24 | chr2:178298800-178329800 | Weak transcription | Colonic Mucosa | Colon |
| 25 | chr2:178298800-178329800 | Weak transcription | Thymus | Thymus |
| 26 | chr2:178298800-178330200 | Weak transcription | Aorta | Aorta |
| 27 | chr2:178298800-178330200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr2:178298800-178331600 | Weak transcription | NHDF-Ad | bronchial |
| 29 | chr2:178298800-178336800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 30 | chr2:178298800-178357800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 31 | chr2:178299000-178310600 | Weak transcription | Lung | lung |
| 32 | chr2:178299000-178312800 | Weak transcription | Liver | Liver |
| 33 | chr2:178299000-178313200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 34 | chr2:178299000-178313600 | Weak transcription | Fetal Lung | lung |
| 35 | chr2:178299000-178313600 | Weak transcription | NH-A | brain |
| 36 | chr2:178299000-178314000 | Weak transcription | Brain Hippocampus Middle | brain |
| 37 | chr2:178299000-178329800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr2:178299000-178330200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr2:178299200-178313400 | Weak transcription | GM12878-XiMat | blood |
| 40 | chr2:178299200-178313600 | Weak transcription | A549 | lung |
| 41 | chr2:178299400-178309600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 42 | chr2:178299400-178313600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 43 | chr2:178299400-178313600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 44 | chr2:178299400-178357800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 45 | chr2:178300000-178312000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 46 | chr2:178300800-178331400 | Weak transcription | Psoas Muscle | Psoas |
| 47 | chr2:178301000-178330200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 48 | chr2:178301600-178339800 | Weak transcription | Small Intestine | intestine |
| 49 | chr2:178301800-178339200 | Weak transcription | Hela-S3 | cervix |
| 50 | chr2:178302200-178312800 | Weak transcription | Stomach Smooth Muscle | stomach |
