The 2.0 version of rSNPBase

Variant report

Variant rs2364853
Chromosome Location chr2:178376680-178376681
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178296400-178397000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr2:178331000-178378600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr2:178331200-178378600 Weak transcription Placenta Placenta
4 chr2:178331200-178379200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr2:178331400-178388400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr2:178331600-178385600 Weak transcription Spleen Spleen
7 chr2:178331800-178389400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:178332000-178392800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr2:178332000-178393800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:178335000-178410600 Weak transcription Thymus Thymus
11 chr2:178337600-178386200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr2:178338000-178403000 Weak transcription Brain Hippocampus Middle brain
13 chr2:178339800-178394400 Weak transcription Hela-S3 cervix
14 chr2:178342400-178392000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr2:178342600-178391000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:178343800-178379400 Weak transcription NHEK skin
17 chr2:178343800-178391200 Weak transcription HMEC breast
18 chr2:178344800-178381200 Weak transcription Brain Cingulate Gyrus brain
19 chr2:178348400-178402600 Weak transcription NHDF-Ad bronchial
20 chr2:178349800-178377600 Weak transcription Fetal Intestine Small intestine
21 chr2:178349800-178378000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr2:178349800-178383400 Weak transcription Fetal Stomach stomach
23 chr2:178349800-178407800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr2:178350000-178407000 Weak transcription Osteobl bone
25 chr2:178354000-178377400 Weak transcription GM12878-XiMat blood
26 chr2:178354600-178392000 Weak transcription Brain Anterior Caudate brain
27 chr2:178355000-178380600 Weak transcription Fetal Heart heart
28 chr2:178355000-178384400 Weak transcription Rectal Smooth Muscle rectum
29 chr2:178356000-178405400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr2:178356400-178384400 Weak transcription Colon Smooth Muscle Colon
31 chr2:178358200-178379200 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr2:178358400-178390000 Weak transcription Colonic Mucosa Colon
33 chr2:178358600-178378400 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr2:178358600-178378800 Weak transcription Duodenum Mucosa Duodenum
35 chr2:178358600-178378800 Weak transcription Fetal Intestine Large intestine
36 chr2:178358600-178378800 Weak transcription Fetal Kidney kidney
37 chr2:178358600-178379200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr2:178358600-178381400 Weak transcription Stomach Smooth Muscle stomach
39 chr2:178358600-178384000 Weak transcription Fetal Lung lung
40 chr2:178358600-178384400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr2:178358600-178386800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr2:178358600-178388400 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr2:178358600-178406000 Weak transcription Ovary ovary
44 chr2:178358600-178417000 Weak transcription Aorta Aorta
45 chr2:178358800-178388600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:178358800-178396600 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr2:178359600-178378000 Weak transcription HSMMtube muscle
48 chr2:178359800-178386000 Weak transcription Muscle Satellite Cultured Cells --
49 chr2:178360200-178379000 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr2:178360600-178405400 Weak transcription NH-A brain

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Last update: Aug 31, 2015