Variant report

Variant rs3769996
Chromosome Location chr2:178337396-178337397
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178296400-178397000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr2:178298800-178357800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr2:178299400-178357800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr2:178301600-178339800 Weak transcription Small Intestine intestine
5 chr2:178301800-178339200 Weak transcription Hela-S3 cervix
6 chr2:178304400-178338800 Weak transcription HMEC breast
7 chr2:178316200-178345600 Weak transcription Fetal Brain Male brain
8 chr2:178330800-178356800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr2:178331000-178354600 Weak transcription Rectal Smooth Muscle rectum
10 chr2:178331000-178357800 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr2:178331000-178357800 Weak transcription Stomach Smooth Muscle stomach
12 chr2:178331000-178361600 Weak transcription Brain Substantia Nigra brain
13 chr2:178331000-178378600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:178331200-178349000 Weak transcription Left Ventricle heart
15 chr2:178331200-178355000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr2:178331200-178358000 Weak transcription Brain Angular Gyrus brain
17 chr2:178331200-178378600 Weak transcription Placenta Placenta
18 chr2:178331200-178379200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr2:178331400-178339000 Weak transcription Ovary ovary
20 chr2:178331400-178339000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:178331400-178339400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr2:178331400-178343600 Weak transcription Fetal Brain Female brain
23 chr2:178331400-178348000 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr2:178331400-178388400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr2:178331600-178343200 Weak transcription Fetal Thymus thymus
26 chr2:178331600-178345800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr2:178331600-178351800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr2:178331600-178357800 Weak transcription Colonic Mucosa Colon
29 chr2:178331600-178385600 Weak transcription Spleen Spleen
30 chr2:178331800-178339000 Weak transcription Aorta Aorta
31 chr2:178331800-178339000 Weak transcription Fetal Muscle Trunk muscle
32 chr2:178331800-178339000 Weak transcription Fetal Stomach stomach
33 chr2:178331800-178339400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr2:178331800-178347800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr2:178331800-178349800 Weak transcription Esophagus oesophagus
36 chr2:178331800-178351200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr2:178331800-178360600 Weak transcription Lung lung
38 chr2:178331800-178373800 Weak transcription Gastric stomach
39 chr2:178331800-178375800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr2:178331800-178375800 Weak transcription Pancreas Pancrea
41 chr2:178331800-178389400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr2:178332000-178338800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr2:178332000-178339000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr2:178332000-178339000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:178332000-178343600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr2:178332000-178392800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:178332000-178393800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr2:178332800-178339000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr2:178332800-178348200 Weak transcription NHDF-Ad bronchial
50 chr2:178332800-178356800 Weak transcription Rectal Mucosa Donor 31 rectum

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