The 2.0 version of rSNPBase

Variant report

Variant rs59578457
Chromosome Location chr2:178218359-178218360
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178203400-178244400 Weak transcription HSMM muscle
2 chr2:178203800-178221600 Weak transcription A549 lung
3 chr2:178212000-178224400 Weak transcription Fetal Heart heart
4 chr2:178213600-178218400 Enhancers Primary monocytes fromperipheralblood blood
5 chr2:178214200-178220400 Weak transcription Brain Substantia Nigra brain
6 chr2:178214400-178219800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:178214400-178220400 Weak transcription Brain Angular Gyrus brain
8 chr2:178214400-178228200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:178214800-178220400 Weak transcription Brain Hippocampus Middle brain
10 chr2:178214800-178221400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:178215000-178218400 Enhancers Adipose Nuclei Adipose
12 chr2:178215400-178220200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr2:178216800-178225400 Weak transcription Ovary ovary
14 chr2:178218000-178218400 Enhancers Stomach Smooth Muscle stomach
15 chr2:178218000-178219400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:178218000-178220200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr2:178218000-178220200 Weak transcription HMEC breast
18 chr2:178218000-178220400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:178218000-178225200 Weak transcription HSMMtube muscle
20 chr2:178218000-178256200 Weak transcription HepG2 liver
21 chr2:178218200-178218400 Enhancers Primary hematopoietic stem cells blood
22 chr2:178218200-178218400 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr2:178218200-178218400 Enhancers Fetal Muscle Leg muscle
24 chr2:178218200-178219000 Enhancers Monocytes-CD14+_RO01746 blood
25 chr2:178218200-178219400 Enhancers Primary neutrophils fromperipheralblood blood
26 chr2:178218200-178220200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr2:178218200-178220200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:178218200-178221200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015