The 2.0 version of rSNPBase

Variant report

Variant rs16865291
Chromosome Location chr2:178335034-178335035
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178296400-178397000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr2:178298800-178336800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr2:178298800-178357800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr2:178299400-178357800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr2:178301600-178339800 Weak transcription Small Intestine intestine
6 chr2:178301800-178339200 Weak transcription Hela-S3 cervix
7 chr2:178304400-178338800 Weak transcription HMEC breast
8 chr2:178316200-178345600 Weak transcription Fetal Brain Male brain
9 chr2:178320000-178336200 Weak transcription Colon Smooth Muscle Colon
10 chr2:178325000-178335800 Strong transcription HepG2 liver
11 chr2:178330800-178356800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:178331000-178354600 Weak transcription Rectal Smooth Muscle rectum
13 chr2:178331000-178357800 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr2:178331000-178357800 Weak transcription Stomach Smooth Muscle stomach
15 chr2:178331000-178361600 Weak transcription Brain Substantia Nigra brain
16 chr2:178331000-178378600 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr2:178331200-178337200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr2:178331200-178349000 Weak transcription Left Ventricle heart
19 chr2:178331200-178355000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:178331200-178358000 Weak transcription Brain Angular Gyrus brain
21 chr2:178331200-178378600 Weak transcription Placenta Placenta
22 chr2:178331200-178379200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr2:178331400-178335200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr2:178331400-178336600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:178331400-178336800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr2:178331400-178339000 Weak transcription Ovary ovary
27 chr2:178331400-178339000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr2:178331400-178339400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr2:178331400-178343600 Weak transcription Fetal Brain Female brain
30 chr2:178331400-178348000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr2:178331400-178388400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr2:178331600-178335600 Weak transcription Primary T cells fromperipheralblood blood
33 chr2:178331600-178335800 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:178331600-178336200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr2:178331600-178336200 Weak transcription Right Ventricle heart
36 chr2:178331600-178336400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:178331600-178336400 Weak transcription Primary B cells from peripheral blood blood
38 chr2:178331600-178336800 Weak transcription Brain Hippocampus Middle brain
39 chr2:178331600-178337200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr2:178331600-178343200 Weak transcription Fetal Thymus thymus
41 chr2:178331600-178345800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr2:178331600-178351800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr2:178331600-178357800 Weak transcription Colonic Mucosa Colon
44 chr2:178331600-178385600 Weak transcription Spleen Spleen
45 chr2:178331800-178335800 Weak transcription Fetal Intestine Large intestine
46 chr2:178331800-178336400 Weak transcription Fetal Muscle Leg muscle
47 chr2:178331800-178336600 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr2:178331800-178339000 Weak transcription Aorta Aorta
49 chr2:178331800-178339000 Weak transcription Fetal Muscle Trunk muscle
50 chr2:178331800-178339000 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015