The 2.0 version of rSNPBase

Variant report

Variant rs56942680
Chromosome Location chr2:178253132-178253133
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178218000-178256200 Weak transcription HepG2 liver
2 chr2:178235400-178256600 Weak transcription Primary T cells from cord blood blood
3 chr2:178239600-178254800 Weak transcription A549 lung
4 chr2:178243000-178256200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr2:178243000-178256400 Weak transcription Fetal Intestine Small intestine
6 chr2:178243200-178256400 Weak transcription Primary T cells fromperipheralblood blood
7 chr2:178243200-178256600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr2:178243200-178256600 Weak transcription NHEK skin
9 chr2:178243200-178257000 Weak transcription Fetal Thymus thymus
10 chr2:178243400-178256400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:178243400-178256600 Weak transcription Duodenum Mucosa Duodenum
12 chr2:178243400-178256600 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr2:178243600-178256600 Weak transcription NHDF-Ad bronchial
14 chr2:178243800-178256600 Weak transcription Fetal Muscle Leg muscle
15 chr2:178244800-178256400 Weak transcription Stomach Smooth Muscle stomach
16 chr2:178245200-178256400 Weak transcription Adipose Nuclei Adipose
17 chr2:178245200-178256400 Weak transcription Brain Hippocampus Middle brain
18 chr2:178245200-178256400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr2:178245200-178256400 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr2:178245400-178255000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:178245600-178254800 Weak transcription HSMM muscle
22 chr2:178245600-178256600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:178245800-178254800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr2:178245800-178256600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr2:178245800-178257000 Weak transcription Left Ventricle heart
26 chr2:178246000-178254800 Weak transcription K562 blood
27 chr2:178246200-178256400 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr2:178249000-178256000 Weak transcription GM12878-XiMat blood
29 chr2:178249000-178256200 Weak transcription Primary hematopoietic stem cells blood
30 chr2:178249200-178254800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:178249200-178256600 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr2:178249400-178254800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr2:178249400-178256400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr2:178249600-178256400 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr2:178250400-178256400 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr2:178253000-178254600 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015