The 2.0 version of rSNPBase

Variant report

Variant rs12614820
Chromosome Location chr2:178217569-178217570
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178197200-178217600 Weak transcription Primary B cells from cord blood blood
2 chr2:178203200-178217800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr2:178203400-178244400 Weak transcription HSMM muscle
4 chr2:178203800-178221600 Weak transcription A549 lung
5 chr2:178210600-178218000 Enhancers HepG2 liver
6 chr2:178212000-178224400 Weak transcription Fetal Heart heart
7 chr2:178212600-178218000 Enhancers Colon Smooth Muscle Colon
8 chr2:178213600-178218400 Enhancers Primary monocytes fromperipheralblood blood
9 chr2:178214200-178220400 Weak transcription Brain Substantia Nigra brain
10 chr2:178214400-178219800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr2:178214400-178220400 Weak transcription Brain Angular Gyrus brain
12 chr2:178214400-178228200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:178214800-178220400 Weak transcription Brain Hippocampus Middle brain
14 chr2:178214800-178221400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:178215000-178218400 Enhancers Adipose Nuclei Adipose
16 chr2:178215200-178217600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr2:178215200-178217800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr2:178215200-178218200 Enhancers Fetal Stomach stomach
19 chr2:178215400-178220200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:178216000-178217600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:178216000-178217600 Enhancers Rectal Mucosa Donor 29 rectum
22 chr2:178216000-178218000 Enhancers HMEC breast
23 chr2:178216400-178217800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr2:178216400-178218000 Enhancers Rectal Mucosa Donor 31 rectum
25 chr2:178216600-178218000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:178216600-178218000 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr2:178216600-178218000 Enhancers Duodenum Smooth Muscle Duodenum
28 chr2:178216600-178218000 Enhancers Placenta Placenta
29 chr2:178216600-178218000 Enhancers Stomach Mucosa stomach
30 chr2:178216600-178218200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr2:178216800-178217600 Enhancers Primary T cells from cord blood blood
32 chr2:178216800-178225400 Weak transcription Ovary ovary
33 chr2:178217000-178218200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:178217200-178217800 Enhancers Primary T helper cells PMA-I stimulated --
35 chr2:178217200-178218000 Weak transcription Stomach Smooth Muscle stomach
36 chr2:178217200-178218000 Enhancers HUVEC blood vessel
37 chr2:178217200-178218200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr2:178217200-178218200 Weak transcription Fetal Muscle Leg muscle
39 chr2:178217400-178217600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
40 chr2:178217400-178217600 Enhancers Fetal Kidney kidney
41 chr2:178217400-178217800 Enhancers Primary B cells from peripheral blood blood
42 chr2:178217400-178217800 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr2:178217400-178217800 Flanking Active TSS Rectal Smooth Muscle rectum
44 chr2:178217400-178218000 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr2:178217400-178218000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:178217400-178218000 Enhancers Primary mononuclear cells fromperipheralblood Blood
47 chr2:178217400-178218000 Enhancers Fetal Lung lung
48 chr2:178217400-178218000 Enhancers HSMMtube muscle
49 chr2:178217400-178218200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
50 chr2:178217400-178218200 Flanking Active TSS Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015