The 2.0 version of rSNPBase

Variant report

Variant rs6433673
Chromosome Location chr2:178383036-178383037
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178296400-178397000 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr2:178331400-178388400 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr2:178331600-178385600 Weak transcription Spleen Spleen
4 chr2:178331800-178389400 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr2:178332000-178392800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr2:178332000-178393800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:178335000-178410600 Weak transcription Thymus Thymus
8 chr2:178337600-178386200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr2:178338000-178403000 Weak transcription Brain Hippocampus Middle brain
10 chr2:178339800-178394400 Weak transcription Hela-S3 cervix
11 chr2:178342400-178392000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:178342600-178391000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr2:178343800-178391200 Weak transcription HMEC breast
14 chr2:178348400-178402600 Weak transcription NHDF-Ad bronchial
15 chr2:178349800-178383400 Weak transcription Fetal Stomach stomach
16 chr2:178349800-178407800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:178350000-178407000 Weak transcription Osteobl bone
18 chr2:178354600-178392000 Weak transcription Brain Anterior Caudate brain
19 chr2:178355000-178384400 Weak transcription Rectal Smooth Muscle rectum
20 chr2:178356000-178405400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr2:178356400-178384400 Weak transcription Colon Smooth Muscle Colon
22 chr2:178358400-178390000 Weak transcription Colonic Mucosa Colon
23 chr2:178358600-178384000 Weak transcription Fetal Lung lung
24 chr2:178358600-178384400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr2:178358600-178386800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr2:178358600-178388400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr2:178358600-178406000 Weak transcription Ovary ovary
28 chr2:178358600-178417000 Weak transcription Aorta Aorta
29 chr2:178358800-178388600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:178358800-178396600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr2:178359800-178386000 Weak transcription Muscle Satellite Cultured Cells --
32 chr2:178360600-178405400 Weak transcription NH-A brain
33 chr2:178362400-178395600 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr2:178363000-178395600 Strong transcription Primary monocytes fromperipheralblood blood
35 chr2:178364400-178416600 Weak transcription Esophagus oesophagus
36 chr2:178367800-178397200 Weak transcription Psoas Muscle Psoas
37 chr2:178370200-178391200 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr2:178371000-178388400 Weak transcription Small Intestine intestine
39 chr2:178371400-178399800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr2:178372600-178405400 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr2:178372800-178385000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr2:178372800-178399200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr2:178372800-178416600 Weak transcription A549 lung
44 chr2:178374400-178394400 Strong transcription HepG2 liver
45 chr2:178375200-178400800 Weak transcription Lung lung
46 chr2:178375400-178394400 Weak transcription Fetal Muscle Leg muscle
47 chr2:178375600-178413800 Weak transcription K562 blood
48 chr2:178376000-178390600 Weak transcription Fetal Brain Female brain
49 chr2:178376000-178397400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr2:178376200-178386400 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015