The 2.0 version of rSNPBase

Variant report

Variant rs6507658
Chromosome Location chr18:43563978-43563979
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43548000-43567000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr18:43554200-43567200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr18:43554400-43566200 Weak transcription Liver Liver
4 chr18:43554600-43566200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr18:43554600-43566800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr18:43554600-43567400 Weak transcription Adipose Nuclei Adipose
7 chr18:43554600-43567800 Weak transcription Primary T cells from cord blood blood
8 chr18:43554600-43567800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr18:43554600-43568000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr18:43554600-43568800 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr18:43554600-43571400 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr18:43557200-43567200 Weak transcription Osteobl bone
13 chr18:43557200-43573400 Weak transcription NHLF lung
14 chr18:43557400-43567200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr18:43557400-43567200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr18:43557800-43567000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr18:43558400-43569600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr18:43558800-43608000 Weak transcription Pancreas Pancrea
19 chr18:43559600-43567200 Weak transcription HMEC breast
20 chr18:43560400-43564800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr18:43560400-43566800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr18:43560400-43567800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr18:43560400-43573600 Weak transcription Fetal Intestine Large intestine
24 chr18:43560400-43582600 Weak transcription Fetal Intestine Small intestine
25 chr18:43560400-43597600 Weak transcription Left Ventricle heart
26 chr18:43560600-43567800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr18:43560600-43575600 Weak transcription Ovary ovary
28 chr18:43560600-43591600 Weak transcription Duodenum Mucosa Duodenum
29 chr18:43561000-43569600 Weak transcription K562 blood
30 chr18:43561000-43573400 Weak transcription Placenta Placenta
31 chr18:43561000-43576800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr18:43561200-43567200 Weak transcription Spleen Spleen
33 chr18:43562400-43572400 Weak transcription NHDF-Ad bronchial
34 chr18:43562400-43583200 Weak transcription Lung lung
35 chr18:43562600-43564200 Enhancers Primary monocytes fromperipheralblood blood
36 chr18:43562600-43571800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr18:43562600-43585600 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr18:43562800-43564200 Enhancers Monocytes-CD14+_RO01746 blood
39 chr18:43562800-43565200 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr18:43563000-43564000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr18:43563000-43565400 Enhancers Skeletal Muscle Male skeletal muscle
42 chr18:43563000-43565600 Enhancers Skeletal Muscle Female skeletal muscle
43 chr18:43563000-43567600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr18:43563200-43564200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
45 chr18:43563400-43592000 Weak transcription Psoas Muscle Psoas
46 chr18:43563800-43567600 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015