The 2.0 version of rSNPBase

Variant report

Variant rs72642433
Chromosome Location chr18:43571515-43571516
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43557200-43573400 Weak transcription NHLF lung
2 chr18:43558800-43608000 Weak transcription Pancreas Pancrea
3 chr18:43560400-43573600 Weak transcription Fetal Intestine Large intestine
4 chr18:43560400-43582600 Weak transcription Fetal Intestine Small intestine
5 chr18:43560400-43597600 Weak transcription Left Ventricle heart
6 chr18:43560600-43575600 Weak transcription Ovary ovary
7 chr18:43560600-43591600 Weak transcription Duodenum Mucosa Duodenum
8 chr18:43561000-43573400 Weak transcription Placenta Placenta
9 chr18:43561000-43576800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr18:43562400-43572400 Weak transcription NHDF-Ad bronchial
11 chr18:43562400-43583200 Weak transcription Lung lung
12 chr18:43562600-43571800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr18:43562600-43585600 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr18:43563400-43592000 Weak transcription Psoas Muscle Psoas
15 chr18:43564000-43573400 Weak transcription HSMMtube muscle
16 chr18:43564600-43576000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr18:43564800-43574200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr18:43564800-43576400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr18:43565000-43573600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr18:43565400-43588800 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr18:43565400-43590800 Weak transcription Colon Smooth Muscle Colon
22 chr18:43565600-43588800 Weak transcription Stomach Smooth Muscle stomach
23 chr18:43566200-43574200 Strong transcription Liver Liver
24 chr18:43566200-43576400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr18:43566200-43577200 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr18:43566400-43577600 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr18:43566800-43572200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr18:43566800-43572200 Weak transcription Fetal Lung lung
29 chr18:43566800-43572400 Strong transcription Primary hematopoietic stem cells blood
30 chr18:43567000-43571600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr18:43567000-43572200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr18:43567200-43571600 Strong transcription Spleen Spleen
33 chr18:43567200-43571800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr18:43567400-43574200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr18:43567800-43578400 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr18:43567800-43588800 Weak transcription NHEK skin
37 chr18:43568000-43574000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr18:43568000-43576200 Strong transcription Primary neutrophils fromperipheralblood blood
39 chr18:43568000-43583200 Weak transcription Esophagus oesophagus
40 chr18:43568400-43578200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr18:43568600-43596800 Weak transcription Adipose Nuclei Adipose
42 chr18:43568800-43571600 Strong transcription Primary T helper cells PMA-I stimulated --
43 chr18:43568800-43575600 Weak transcription Primary T cells fromperipheralblood blood
44 chr18:43568800-43588600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr18:43568800-43607800 Weak transcription Rectal Smooth Muscle rectum
46 chr18:43569000-43573400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr18:43569000-43573800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr18:43569200-43573400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr18:43569200-43573400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr18:43569200-43577000 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015