Variant report

Variant	rs6592670
Chromosome Location	chr11:76544662-76544663
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11236954	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11236960	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11236961	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11600598	0.83[EUR][1000 genomes]
rs11600737	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11607420	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11608202	0.83[EUR][1000 genomes]
rs12278208	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12278844	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1440976	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28407842	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56048519	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57918050	0.87[EUR][1000 genomes]
rs61336866	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592666	0.97[ASN][1000 genomes]
rs6592669	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7106688	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7122943	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7128590	1.00[EUR][1000 genomes]
rs7930972	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7932943	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7942487	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7948381	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76535400-76546400	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr11:76535400-76549000	Weak transcription	Small Intestine	intestine
3	chr11:76536800-76547800	Weak transcription	Left Ventricle	heart
4	chr11:76537200-76547200	Weak transcription	Spleen	Spleen
5	chr11:76537400-76547000	Weak transcription	Hela-S3	cervix
6	chr11:76542000-76547200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr11:76542000-76547200	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr11:76542200-76545000	Weak transcription	Colon Smooth Muscle	Colon
9	chr11:76542200-76545400	Weak transcription	Lung	lung
10	chr11:76542200-76546800	Weak transcription	K562	blood
11	chr11:76542200-76547800	Weak transcription	Brain Hippocampus Middle	brain
12	chr11:76542400-76545000	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr11:76542400-76547000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr11:76542400-76547000	Weak transcription	Pancreas	Pancrea
15	chr11:76542400-76547200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr11:76542400-76547200	Weak transcription	Colonic Mucosa	Colon
17	chr11:76542400-76547200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr11:76542400-76547400	Weak transcription	NHEK	skin
19	chr11:76542400-76547600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr11:76542400-76547600	Weak transcription	Fetal Lung	lung
21	chr11:76542400-76547600	Weak transcription	Stomach Smooth Muscle	stomach
22	chr11:76542400-76548800	Weak transcription	Brain Inferior Temporal Lobe	brain
23	chr11:76542600-76545400	Weak transcription	Adipose Nuclei	Adipose
24	chr11:76542600-76547200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr11:76543800-76546000	Enhancers	Placenta	Placenta
26	chr11:76544000-76545200	Weak transcription	Primary monocytes fromperipheralblood	blood
27	chr11:76544000-76545200	Weak transcription	Fetal Muscle Leg	muscle
28	chr11:76544000-76547200	Weak transcription	Monocytes-CD14+_RO01746	blood
29	chr11:76544600-76544800	Enhancers	Esophagus	oesophagus
30	chr11:76544600-76545200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr11:76544600-76548800	Enhancers	Fetal Stomach	stomach

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