Variant report

Variant	rs7122943
Chromosome Location	chr11:76541678-76541679
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11236954	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11236960	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11236961	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11600598	0.83[EUR][1000 genomes]
rs11600737	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11607420	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11608202	0.83[EUR][1000 genomes]
rs12278208	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12278844	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1440976	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28407842	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56048519	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs57918050	0.87[EUR][1000 genomes]
rs61336866	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592666	0.88[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs6592669	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6592670	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7106688	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7128590	1.00[EUR][1000 genomes]
rs7930972	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7932943	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7942487	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7948381	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76535400-76546400	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr11:76535400-76549000	Weak transcription	Small Intestine	intestine
3	chr11:76536400-76544600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:76536800-76547800	Weak transcription	Left Ventricle	heart
5	chr11:76537200-76547200	Weak transcription	Spleen	Spleen
6	chr11:76537400-76541800	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr11:76537400-76541800	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr11:76537400-76547000	Weak transcription	Hela-S3	cervix
9	chr11:76540600-76542200	Enhancers	Lung	lung
10	chr11:76540600-76542200	Enhancers	K562	blood
11	chr11:76541000-76542200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr11:76541200-76542400	Enhancers	Placenta	Placenta
13	chr11:76541200-76542600	Enhancers	Fetal Stomach	stomach
14	chr11:76541400-76541800	Enhancers	Pancreas	Pancrea
15	chr11:76541400-76542000	Bivalent Enhancer	Fetal Intestine Small	intestine
16	chr11:76541400-76542000	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr11:76541400-76542200	Enhancers	NHDF-Ad	bronchial
18	chr11:76541400-76542400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr11:76541400-76542400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
20	chr11:76541400-76542400	Enhancers	Colonic Mucosa	Colon
21	chr11:76541400-76542600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr11:76541400-76542600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr11:76541400-76542600	Enhancers	Adipose Nuclei	Adipose
24	chr11:76541600-76542000	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr11:76541600-76542200	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr11:76541600-76542200	Enhancers	Aorta	Aorta
27	chr11:76541600-76542200	Flanking Active TSS	Stomach Smooth Muscle	stomach
28	chr11:76541600-76542200	Bivalent Enhancer	Osteobl	bone
29	chr11:76541600-76542400	Enhancers	Cortex derived primary cultured neurospheres	brain
30	chr11:76541600-76542400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr11:76541600-76542400	Enhancers	Brain Inferior Temporal Lobe	brain
32	chr11:76541600-76542400	Enhancers	Duodenum Smooth Muscle	Duodenum
33	chr11:76541600-76542400	Enhancers	Esophagus	oesophagus
34	chr11:76541600-76542400	Enhancers	Fetal Lung	lung
35	chr11:76541600-76542400	Enhancers	Rectal Smooth Muscle	rectum
36	chr11:76541600-76542400	Enhancers	NHEK	skin
37	chr11:76541600-76542600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr11:76541600-76542600	Enhancers	Fetal Muscle Leg	muscle

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