The 2.0 version of rSNPBase

Variant report

Variant rs6671076
Chromosome Location chr1:186928056-186928057
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr1:186895400-186937000 Weak transcription Rectal Smooth Muscle rectum
5 chr1:186900000-186935800 Weak transcription NHDF-Ad bronchial
6 chr1:186908000-186933800 Weak transcription Colon Smooth Muscle Colon
7 chr1:186909800-186932600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:186912400-186934600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:186917000-186929000 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:186917400-186934800 Weak transcription Colonic Mucosa Colon
11 chr1:186919000-186937000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:186919600-186944800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:186919800-186928600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:186920400-186933600 Weak transcription Adipose Nuclei Adipose
15 chr1:186920400-186939000 Weak transcription A549 lung
16 chr1:186921600-186935400 Weak transcription Fetal Intestine Large intestine
17 chr1:186923400-186958800 Weak transcription Duodenum Mucosa Duodenum
18 chr1:186925400-186929200 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:186926800-186929200 Weak transcription Fetal Stomach stomach
20 chr1:186926800-186933400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:186926800-186933600 Weak transcription Hela-S3 cervix
22 chr1:186926800-186936800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:186926800-186951200 Weak transcription Fetal Intestine Small intestine
24 chr1:186927000-186928200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:186927000-186930200 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:186927000-186933600 Weak transcription Primary hematopoietic stem cells blood
27 chr1:186927200-186933200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:186927200-186934000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr1:186927400-186930800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:186927400-186943400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:186927800-186929800 Weak transcription Stomach Smooth Muscle stomach
32 chr1:186928000-186928400 Strong transcription Primary monocytes fromperipheralblood blood
33 chr1:186928000-186929600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:186928000-186930200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:186928000-186936400 Weak transcription NH-A brain

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Last update: Aug 31, 2015