The 2.0 version of rSNPBase

Variant report

Variant rs6691582
Chromosome Location chr1:186924827-186924828
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr1:186895400-186937000 Weak transcription Rectal Smooth Muscle rectum
5 chr1:186900000-186935800 Weak transcription NHDF-Ad bronchial
6 chr1:186904000-186925200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:186908000-186933800 Weak transcription Colon Smooth Muscle Colon
8 chr1:186909800-186932600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:186912400-186934600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:186917000-186929000 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:186917400-186934800 Weak transcription Colonic Mucosa Colon
12 chr1:186919000-186937000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:186919400-186925400 Weak transcription Stomach Smooth Muscle stomach
14 chr1:186919600-186944800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:186919800-186928600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:186920000-186925200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:186920200-186925200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:186920400-186933600 Weak transcription Adipose Nuclei Adipose
19 chr1:186920400-186939000 Weak transcription A549 lung
20 chr1:186921000-186926000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:186921600-186935400 Weak transcription Fetal Intestine Large intestine
22 chr1:186922200-186925600 Weak transcription Fetal Intestine Small intestine
23 chr1:186922800-186925200 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:186923000-186925200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:186923000-186926000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:186923200-186925000 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr1:186923200-186926600 Weak transcription Primary hematopoietic stem cells blood
28 chr1:186923400-186958800 Weak transcription Duodenum Mucosa Duodenum
29 chr1:186923800-186928000 Weak transcription Fetal Lung lung
30 chr1:186924000-186925000 Weak transcription Primary monocytes fromperipheralblood blood
31 chr1:186924000-186925200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:186924400-186925000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:186924800-186925600 Weak transcription Fetal Stomach stomach
34 chr1:186924800-186926400 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015