The 2.0 version of rSNPBase

Variant report

Variant rs7522213
Chromosome Location chr1:186917572-186917573
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:186890000-186924400 Weak transcription Fetal Stomach stomach
4 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:186892800-186924000 Strong transcription Primary monocytes fromperipheralblood blood
6 chr1:186895400-186937000 Weak transcription Rectal Smooth Muscle rectum
7 chr1:186897600-186917800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:186897600-186920800 Weak transcription Fetal Intestine Small intestine
9 chr1:186900000-186935800 Weak transcription NHDF-Ad bronchial
10 chr1:186904000-186925200 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:186906600-186920800 Weak transcription Fetal Intestine Large intestine
12 chr1:186908000-186933800 Weak transcription Colon Smooth Muscle Colon
13 chr1:186909800-186922600 Weak transcription Duodenum Mucosa Duodenum
14 chr1:186909800-186932600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:186910000-186920000 Weak transcription Adipose Nuclei Adipose
16 chr1:186910400-186917600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:186910400-186919000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:186912400-186934600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:186913600-186918000 Enhancers HUVEC blood vessel
20 chr1:186915200-186917600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:186915600-186918200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:186915600-186923200 Strong transcription Primary hematopoietic stem cells blood
23 chr1:186915800-186919400 Weak transcription NH-A brain
24 chr1:186916000-186920200 Strong transcription Hela-S3 cervix
25 chr1:186916800-186918200 Enhancers Cortex derived primary cultured neurospheres brain
26 chr1:186917000-186919200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr1:186917000-186919800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:186917000-186919800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:186917000-186929000 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:186917400-186918200 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr1:186917400-186918200 Enhancers Osteobl bone
32 chr1:186917400-186934800 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015