The 2.0 version of rSNPBase

Variant report

Variant rs6679956
Chromosome Location chr1:186905963-186905964
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:186883800-186906800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:186890000-186924400 Weak transcription Fetal Stomach stomach
5 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr1:186892800-186924000 Strong transcription Primary monocytes fromperipheralblood blood
7 chr1:186895400-186937000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:186896400-186908600 Weak transcription Adipose Nuclei Adipose
9 chr1:186897200-186909200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:186897400-186908600 Weak transcription Duodenum Mucosa Duodenum
11 chr1:186897600-186917800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:186897600-186920800 Weak transcription Fetal Intestine Small intestine
13 chr1:186897800-186906200 Weak transcription Fetal Intestine Large intestine
14 chr1:186900000-186935800 Weak transcription NHDF-Ad bronchial
15 chr1:186900200-186909000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:186900800-186910400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:186902600-186911000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:186903200-186906200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:186904000-186925200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:186904800-186906000 Enhancers Cortex derived primary cultured neurospheres brain
21 chr1:186904800-186909000 Weak transcription Hela-S3 cervix
22 chr1:186905000-186907600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:186905400-186906600 Weak transcription Primary hematopoietic stem cells blood
24 chr1:186905600-186907200 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015