Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10121700	0.86[EUR][1000 genomes]
rs10961068	0.89[EUR][1000 genomes]
rs10961085	0.91[EUR][1000 genomes]
rs10961086	0.93[EUR][1000 genomes]
rs10961093	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12237191	0.81[EUR][1000 genomes]
rs12238169	0.80[EUR][1000 genomes]
rs1333993	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1333994	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1333996	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1556578	0.86[EUR][1000 genomes]
rs17462133	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17521458	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17521660	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1831906	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2151660	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2184231	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs28402800	0.93[EUR][1000 genomes]
rs2890968	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2890969	0.83[EUR][1000 genomes]
rs34561278	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs988017	0.81[EUR][1000 genomes]
rs988018	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831515	chr9:13333205-13517308	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2761501	chr9:13486364-13504924	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13493000-13526800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr9:13500400-13502400	Weak transcription	Fetal Muscle Leg	muscle
3	chr9:13501800-13503000	Enhancers	H1 Cell Line	embryonic stem cell

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