Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11659207	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs11659904	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11659906	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11661270	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11663064	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12954845	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12965167	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12970160	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs17611328	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17684326	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs34047317	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34315959	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs34775621	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs34791772	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34909051	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35531875	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs35601155	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66522730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs66950491	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs66985226	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs67384004	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs71352701	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761995	chr18:24214286-24502570	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:24347400-24354000	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chr18:24351800-24360400	Weak transcription	Dnd41	blood

Quick Search: