Variant report

Variant	rs6798989
Chromosome Location	chr3:16986290-16986291
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs17272789	0.83[EUR][1000 genomes]
rs4452307	0.82[EUR][1000 genomes]
rs56386177	0.82[EUR][1000 genomes]
rs57955299	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73146928	0.92[EUR][1000 genomes]
rs73151352	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73151357	0.83[EUR][1000 genomes]
rs73153248	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7614547	0.95[EUR][1000 genomes]
rs7649318	0.82[EUR][1000 genomes]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:16959400-16986600	Weak transcription	Aorta	Aorta
2	chr3:16977800-16987400	Enhancers	Primary T helper cells PMA-I stimulated	--
3	chr3:16978000-16991200	Weak transcription	Adipose Nuclei	Adipose
4	chr3:16979000-16990600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr3:16979400-16989800	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr3:16983000-16988600	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr3:16983400-16987600	Enhancers	Fetal Heart	heart
8	chr3:16984000-16987200	Weak transcription	Right Ventricle	heart
9	chr3:16984000-16992600	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr3:16984200-16986400	Weak transcription	Psoas Muscle	Psoas
11	chr3:16984200-17003400	Weak transcription	Spleen	Spleen
12	chr3:16984400-16987400	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr3:16984600-16986600	Weak transcription	Primary B cells from cord blood	blood
14	chr3:16984800-16988000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr3:16985000-16986800	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr3:16985000-16987400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr3:16985000-16988200	Weak transcription	Primary hematopoietic stem cells	blood
18	chr3:16985000-16989000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr3:16985000-16989400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr3:16985000-16989600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
21	chr3:16985000-16992400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
22	chr3:16985000-17003400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
23	chr3:16985400-16986800	Enhancers	Ovary	ovary
24	chr3:16985600-16990600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
25	chr3:16985600-16992400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr3:16985600-17000400	Weak transcription	Primary T cells from cord blood	blood
27	chr3:16985800-16986400	Strong transcription	Primary B cells from peripheral blood	blood
28	chr3:16985800-16986600	Genic enhancers	Primary T cells fromperipheralblood	blood
29	chr3:16985800-16986600	Enhancers	Left Ventricle	heart
30	chr3:16985800-16986800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
31	chr3:16985800-16990800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr3:16986000-16986600	Weak transcription	Right Atrium	heart
33	chr3:16986000-16986800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
34	chr3:16986000-16988000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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