Variant report

Variant	rs6908858
Chromosome Location	chr6:71990599-71990600
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10945297	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12055385	0.93[ASN][1000 genomes]
rs13218874	0.83[ASN][1000 genomes]
rs1322759	0.83[ASN][1000 genomes]
rs2208845	0.93[CHB][hapmap];0.88[CHD][hapmap];0.87[ASN][1000 genomes]
rs2224656	0.86[ASN][1000 genomes]
rs2273888	0.87[CHB][hapmap];0.83[CHD][hapmap];0.83[ASN][1000 genomes]
rs58732838	0.83[ASN][1000 genomes]
rs59769896	0.93[ASN][1000 genomes]
rs60555932	0.91[ASN][1000 genomes]
rs6907173	0.88[AFR][1000 genomes]
rs6935796	0.87[CHB][hapmap];0.88[CHD][hapmap];0.80[MEX][hapmap]
rs7452880	0.95[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7773440	0.80[ASN][1000 genomes]
rs8180646	0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9294899	0.87[CHB][hapmap];0.85[CHD][hapmap];0.81[ASN][1000 genomes]
rs9342827	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9342828	0.93[ASN][1000 genomes]
rs9342829	0.86[CHB][hapmap];0.82[ASN][1000 genomes]
rs9342830	0.83[ASN][1000 genomes]
rs9346451	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs9346452	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs9346455	0.92[ASN][1000 genomes]
rs9346457	0.83[ASN][1000 genomes]
rs9346459	0.84[ASN][1000 genomes]
rs9346460	0.83[ASN][1000 genomes]
rs9346463	0.86[CHB][hapmap]
rs9354985	1.00[CHB][hapmap];0.97[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9354996	0.86[CHB][hapmap];0.90[GIH][hapmap];0.87[JPT][hapmap]
rs9360443	0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9360444	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9360445	0.83[ASN][1000 genomes]
rs9360447	0.82[ASN][1000 genomes]
rs9364148	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9364149	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9364150	0.93[ASN][1000 genomes]
rs9364151	0.87[ASN][1000 genomes]
rs9364152	0.93[CHB][hapmap];0.88[ASN][1000 genomes]
rs9364153	0.87[CHB][hapmap];0.83[CHD][hapmap];0.86[ASN][1000 genomes]
rs9455418	0.88[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71988200-71991200	Weak transcription	Lung	lung
2	chr6:71988200-71997400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:71988200-71997400	Weak transcription	Left Ventricle	heart
4	chr6:71988400-71991200	Weak transcription	Esophagus	oesophagus
5	chr6:71988400-71997800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr6:71989800-71991800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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