Variant report

Variant	rs7008239
Chromosome Location	chr8:91677427-91677428
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91675067..91677909-chr8:91679450..91681786,2	K562	blood:
2	chr8:91671458..91673223-chr8:91675820..91678069,2	K562	blood:
3	chr8:91658689..91660219-chr8:91675153..91678111,2	K562	blood:
4	chr8:91671723..91673870-chr8:91675820..91677722,2	K562	blood:
5	chr8:91656207..91664773-chr8:91669059..91678442,20	MCF-7	breast:

Variant related genes	Relation type
ENSG00000180694	Chromatin interaction
ENSG00000246792	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10090406	0.87[ASN][1000 genomes]
rs10091274	0.87[ASN][1000 genomes]
rs10504898	0.81[EUR][1000 genomes]
rs10808624	0.87[ASN][1000 genomes]
rs10808625	0.87[ASN][1000 genomes]
rs10808626	0.87[ASN][1000 genomes]
rs11777332	0.88[ASN][1000 genomes]
rs12543806	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs13259610	0.82[AMR][1000 genomes]
rs13266461	0.80[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs16905145	0.87[ASN][1000 genomes]
rs28568272	0.84[ASN][1000 genomes]
rs35547810	0.85[ASN][1000 genomes]
rs4236824	0.85[ASN][1000 genomes]
rs4236825	0.87[ASN][1000 genomes]
rs4236826	0.87[ASN][1000 genomes]
rs4236827	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4236828	0.87[ASN][1000 genomes]
rs4301409	0.88[ASN][1000 genomes]
rs4323436	0.87[ASN][1000 genomes]
rs4330649	0.85[ASN][1000 genomes]
rs4330650	0.87[ASN][1000 genomes]
rs4332092	0.88[ASN][1000 genomes]
rs4335090	0.87[ASN][1000 genomes]
rs4335091	0.86[ASN][1000 genomes]
rs4376466	0.87[ASN][1000 genomes]
rs4377923	0.88[ASN][1000 genomes]
rs4377924	0.88[ASN][1000 genomes]
rs4442097	0.87[ASN][1000 genomes]
rs4538831	0.88[ASN][1000 genomes]
rs4606020	0.81[ASN][1000 genomes]
rs4637779	0.87[ASN][1000 genomes]
rs4642598	0.88[ASN][1000 genomes]
rs4735295	0.93[ASN][1000 genomes]
rs4735306	0.87[ASN][1000 genomes]
rs4735308	0.88[ASN][1000 genomes]
rs4735309	0.87[ASN][1000 genomes]
rs60187521	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6471245	0.88[ASN][1000 genomes]
rs6985723	0.81[ASN][1000 genomes]
rs6993648	0.88[ASN][1000 genomes]
rs6994433	0.88[ASN][1000 genomes]
rs7009348	0.81[ASN][1000 genomes]
rs7017260	0.87[ASN][1000 genomes]
rs7818125	0.88[ASN][1000 genomes]
rs7821994	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7832679	0.88[ASN][1000 genomes]
rs7839617	0.87[ASN][1000 genomes]
rs7840113	0.87[ASN][1000 genomes]
rs7840203	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs885497	0.88[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91666800-91677800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:91675800-91677600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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