Variant report

Variant	rs7818125
Chromosome Location	chr8:91680957-91680958
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:91679586..91682338-chr8:91683375..91685862,2	MCF-7	breast:
2	chr8:91680534..91682266-chr8:91687162..91689397,2	MCF-7	breast:
3	chr8:91653197..91659696-chr8:91680011..91690485,28	MCF-7	breast:
4	chr8:91665621..91667462-chr8:91678838..91681595,2	MCF-7	breast:
5	chr8:91675067..91677256-chr8:91678996..91683424,4	K562	blood:
6	chr8:91680263..91682720-chr8:91684453..91686696,2	K562	blood:
7	chr8:91652941..91663346-chr8:91680436..91690653,24	MCF-7	breast:
8	chr8:91675067..91677909-chr8:91679450..91681786,2	K562	blood:
9	chr8:91671956..91674475-chr8:91679710..91683408,3	K562	blood:
10	chr8:91669462..91675137-chr8:91678478..91682798,5	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000246792	Chromatin interaction
ENSG00000180694	Chromatin interaction

Extended variants
information (count: 92 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:92)

rs_ID	r²[population]
rs10086155	0.82[CEU][hapmap];0.90[CHB][hapmap];0.89[JPT][hapmap]
rs10090406	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10091274	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10808624	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10808625	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10808626	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10956763	0.86[CEU][hapmap];0.85[CHB][hapmap];0.89[JPT][hapmap];0.90[YRI][hapmap];0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10956764	0.86[CEU][hapmap];0.85[CHB][hapmap];0.89[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs10956765	0.81[CEU][hapmap]
rs10956770	0.81[CEU][hapmap]
rs10956776	0.82[CEU][hapmap]
rs10956777	0.82[CEU][hapmap]
rs1125502	0.96[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap];0.83[YRI][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11777332	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12550194	0.81[CEU][hapmap]
rs12677100	0.83[JPT][hapmap]
rs13265863	0.81[CEU][hapmap]
rs1354516	0.81[CEU][hapmap]
rs1394503	0.82[CEU][hapmap]
rs1394505	0.82[CEU][hapmap]
rs1394509	0.81[CEU][hapmap]
rs1463916	0.82[CEU][hapmap]
rs1463917	0.82[CEU][hapmap];0.82[YRI][hapmap]
rs1463918	0.81[CEU][hapmap];0.82[YRI][hapmap]
rs1463919	0.81[CEU][hapmap]
rs1604915	0.81[CEU][hapmap]
rs16905145	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1827668	0.82[CEU][hapmap]
rs1976495	0.81[CEU][hapmap]
rs2339228	0.81[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs2339229	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2339230	0.81[CEU][hapmap];0.88[JPT][hapmap];0.82[ASN][1000 genomes]
rs34753356	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35547810	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4236824	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4236825	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4236826	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4236827	0.82[CEU][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs4236828	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4301409	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4323436	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4330649	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4330650	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4332092	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4335090	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4335091	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4338064	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4376466	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4377923	1.00[CEU][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4377924	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4442097	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4520126	0.86[CEU][hapmap];0.85[CHB][hapmap];0.89[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4538831	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4606020	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4637779	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4642598	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4734296	0.82[CEU][hapmap];0.92[JPT][hapmap];0.82[YRI][hapmap];0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4735295	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs4735306	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4735308	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4735309	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4735341	0.82[CEU][hapmap];0.90[CHB][hapmap];0.89[JPT][hapmap];0.85[ASN][1000 genomes]
rs4735363	0.82[CEU][hapmap]
rs4735368	0.81[CEU][hapmap];0.82[YRI][hapmap]
rs6471243	1.00[CHB][hapmap];0.90[ASN][1000 genomes]
rs6471245	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6471248	0.86[CEU][hapmap];0.85[CHB][hapmap];0.89[JPT][hapmap];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6471249	0.86[CEU][hapmap];0.85[CHB][hapmap];0.89[JPT][hapmap];0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6471251	0.82[CEU][hapmap]
rs6471252	0.82[CEU][hapmap]
rs6983827	0.80[CEU][hapmap]
rs6985723	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6993648	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6994433	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6997009	0.85[CEU][hapmap];0.85[CHB][hapmap];0.88[JPT][hapmap];0.84[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6998736	0.89[CEU][hapmap];0.89[CHB][hapmap];0.88[JPT][hapmap];0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7003026	0.86[CEU][hapmap];0.90[CHB][hapmap];0.89[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7008239	0.88[ASN][1000 genomes]
rs7009348	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7017260	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7814682	0.81[CEU][hapmap]
rs7816709	0.82[CEU][hapmap]
rs7817599	0.82[CEU][hapmap]
rs7821994	0.82[ASN][1000 genomes]
rs7822742	0.86[CEU][hapmap];0.84[CHB][hapmap];0.87[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7832679	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7835610	0.85[CEU][hapmap];0.85[CHB][hapmap];0.88[JPT][hapmap];0.88[ASN][1000 genomes]
rs7839617	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7840113	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7840203	0.82[ASN][1000 genomes]
rs7845074	0.82[CEU][hapmap]
rs885497	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91678800-91682600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr8:91679000-91682600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:91679000-91682600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:91679000-91682600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:91679000-91682600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr8:91679000-91683000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr8:91679000-91683400	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr8:91679000-91688000	Weak transcription	Aorta	Aorta
9	chr8:91679200-91683000	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr8:91679200-91683000	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr8:91679400-91681200	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr8:91679600-91682600	Weak transcription	Fetal Muscle Leg	muscle
13	chr8:91680400-91682600	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr8:91680400-91683400	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr8:91680600-91681000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
16	chr8:91680600-91683800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr8:91680600-91684400	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr8:91680600-91689800	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr8:91680800-91681000	Enhancers	H1 Cell Line	embryonic stem cell

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