Variant report

Variant	rs4735295
Chromosome Location	chr8:91671608-91671609
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:91658517..91660339-chr8:91670589..91672370,2	K562	blood:
2	chr8:91660550..91662849-chr8:91670707..91673792,3	K562	blood:
3	chr8:91669462..91675137-chr8:91678478..91682798,5	MCF-7	breast:
4	chr8:91671458..91673223-chr8:91675820..91678069,2	K562	blood:
5	chr8:91669120..91671643-chr8:91681940..91683479,2	K562	blood:
6	chr8:91660550..91663443-chr8:91670612..91673792,3	K562	blood:
7	chr8:91656410..91660388-chr8:91669183..91672370,5	K562	blood:
8	chr8:91656207..91664773-chr8:91669059..91678442,20	MCF-7	breast:
9	chr8:91670143..91672492-chr8:91681979..91683592,2	K562	blood:
10	chr8:91666096..91668399-chr8:91670689..91672510,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000246792	Chromatin interaction
ENSG00000180694	Chromatin interaction

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:82)

rs_ID	r²[population]
rs10086155	0.94[JPT][hapmap]
rs10090406	0.83[ASN][1000 genomes]
rs10091274	0.83[ASN][1000 genomes]
rs10808624	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10808625	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs10808626	0.83[ASN][1000 genomes]
rs10956750	0.84[CEU][hapmap]
rs10956763	0.94[JPT][hapmap]
rs10956764	0.94[JPT][hapmap]
rs1125502	0.89[JPT][hapmap]
rs11777332	0.83[ASN][1000 genomes]
rs11784529	0.84[CEU][hapmap]
rs12543806	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12677100	0.91[CHB][hapmap];0.88[JPT][hapmap]
rs13255452	0.83[CEU][hapmap]
rs13262354	0.84[CEU][hapmap]
rs13266461	1.00[CEU][hapmap];1.00[CHB][hapmap];0.80[JPT][hapmap];0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13268594	0.88[CEU][hapmap]
rs13277387	0.84[CEU][hapmap]
rs16905041	0.85[CEU][hapmap]
rs16905145	0.83[ASN][1000 genomes]
rs1858674	0.84[CEU][hapmap]
rs2023626	0.84[CEU][hapmap]
rs2073640	0.84[CEU][hapmap]
rs2105965	0.81[CEU][hapmap]
rs2105967	0.87[CEU][hapmap]
rs2157607	0.81[CEU][hapmap]
rs2339228	0.94[JPT][hapmap]
rs2339230	0.94[JPT][hapmap]
rs28568272	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35547810	0.82[ASN][1000 genomes]
rs4236824	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs4236825	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4236826	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4236827	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4236828	0.83[ASN][1000 genomes]
rs4301409	0.83[ASN][1000 genomes]
rs4323436	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4324886	0.87[EUR][1000 genomes]
rs4330649	0.94[JPT][hapmap];0.80[ASN][1000 genomes]
rs4330650	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs4332092	0.83[ASN][1000 genomes]
rs4335090	0.83[ASN][1000 genomes]
rs4335091	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs4376466	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4377923	0.83[ASN][1000 genomes]
rs4377924	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs4442097	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4495387	0.84[CEU][hapmap]
rs4520126	0.94[JPT][hapmap]
rs4538831	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs4637779	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4642598	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs4734269	0.84[CEU][hapmap]
rs4734296	1.00[JPT][hapmap]
rs4735306	0.83[ASN][1000 genomes]
rs4735308	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs4735309	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs4735341	0.94[JPT][hapmap]
rs6471243	0.85[CEU][hapmap];0.83[ASN][1000 genomes]
rs6471245	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs6471248	0.94[JPT][hapmap]
rs6471249	0.94[JPT][hapmap]
rs6986689	0.84[CEU][hapmap]
rs6993648	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs6994433	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs6997009	0.94[JPT][hapmap]
rs6998736	0.94[JPT][hapmap]
rs7003026	0.94[JPT][hapmap]
rs7008239	0.93[ASN][1000 genomes]
rs7017260	0.83[ASN][1000 genomes]
rs7463641	0.80[CEU][hapmap]
rs7818125	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs7821994	0.89[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7822742	0.93[JPT][hapmap]
rs7823461	0.84[CEU][hapmap]
rs7832679	0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs7835610	0.94[JPT][hapmap]
rs7839617	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7840113	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7840203	0.91[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs885497	0.94[JPT][hapmap];0.83[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91666800-91677800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links