Variant report

Variant rs704585
Chromosome Location chr3:98503683-98503684
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98478800-98515200 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr3:98483000-98517600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr3:98483200-98518000 Weak transcription Stomach Smooth Muscle stomach
4 chr3:98483600-98513600 Weak transcription Brain Germinal Matrix brain
5 chr3:98483800-98515000 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr3:98484000-98514000 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr3:98484200-98515200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr3:98484800-98529800 Weak transcription Primary B cells from cord blood blood
9 chr3:98490200-98525200 Weak transcription Rectal Smooth Muscle rectum
10 chr3:98492200-98517800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr3:98494600-98506000 Enhancers Aorta Aorta
12 chr3:98496600-98503800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr3:98497000-98524600 Weak transcription Fetal Brain Male brain
14 chr3:98497800-98517200 Weak transcription Fetal Brain Female brain
15 chr3:98498000-98516600 Weak transcription Stomach Mucosa stomach
16 chr3:98498200-98505400 Strong transcription Thymus Thymus
17 chr3:98498400-98504600 Weak transcription Fetal Intestine Small intestine
18 chr3:98498800-98506800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr3:98498800-98512800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr3:98499000-98504200 Weak transcription HSMM muscle
21 chr3:98499200-98504200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr3:98499200-98504600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr3:98499200-98516600 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr3:98499400-98506400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr3:98499600-98507800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr3:98499600-98516600 Weak transcription Brain Angular Gyrus brain
27 chr3:98499800-98514800 Weak transcription Dnd41 blood
28 chr3:98500200-98506000 Enhancers HMEC breast
29 chr3:98500600-98504400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr3:98500800-98505600 Genic enhancers Monocytes-CD14+_RO01746 blood
31 chr3:98501000-98506600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr3:98501000-98507400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr3:98501200-98504400 Weak transcription Brain Hippocampus Middle brain
34 chr3:98501200-98513400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr3:98501400-98505800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr3:98501400-98506000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:98501400-98506000 Enhancers NH-A brain
38 chr3:98501800-98504200 Enhancers Liver Liver
39 chr3:98501800-98504800 Enhancers NHEK skin
40 chr3:98502000-98506000 Enhancers Muscle Satellite Cultured Cells --
41 chr3:98502200-98505000 Enhancers HepG2 liver
42 chr3:98502200-98506200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr3:98502200-98506600 Genic enhancers Primary monocytes fromperipheralblood blood
44 chr3:98502200-98519800 Weak transcription Fetal Kidney kidney
45 chr3:98502200-98523800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:98502400-98504800 Weak transcription GM12878-XiMat blood
47 chr3:98502400-98523800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr3:98502600-98505800 Weak transcription Fetal Intestine Large intestine
49 chr3:98502600-98513400 Weak transcription Fetal Stomach stomach
50 chr3:98502800-98503800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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