Variant report

Variant rs2470859
Chromosome Location chr3:98593555-98593556
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98536200-98594200 Weak transcription HepG2 liver
2 chr3:98567600-98601000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr3:98575400-98603800 Weak transcription Placenta Amnion Placenta Amnion
4 chr3:98575800-98603200 Weak transcription Colon Smooth Muscle Colon
5 chr3:98575800-98603800 Weak transcription Stomach Smooth Muscle stomach
6 chr3:98576000-98598600 Weak transcription Fetal Kidney kidney
7 chr3:98577200-98598800 Weak transcription Left Ventricle heart
8 chr3:98578000-98601000 Weak transcription Lung lung
9 chr3:98583400-98611400 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr3:98584400-98607200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr3:98584600-98604200 Weak transcription H1 Cell Line embryonic stem cell
12 chr3:98586200-98594000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:98586200-98595800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr3:98586400-98594000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr3:98586600-98594200 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr3:98586600-98598600 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr3:98587200-98596200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr3:98587200-98604600 Weak transcription Ovary ovary
19 chr3:98587400-98594200 Strong transcription Muscle Satellite Cultured Cells --
20 chr3:98587400-98595600 Strong transcription NHEK skin
21 chr3:98587800-98601800 Strong transcription HSMM muscle
22 chr3:98589000-98594200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr3:98589000-98598600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr3:98589200-98602200 Weak transcription NHLF lung
25 chr3:98589400-98598800 Weak transcription Fetal Muscle Trunk muscle
26 chr3:98589400-98609200 Weak transcription Fetal Intestine Large intestine
27 chr3:98589600-98597000 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr3:98589600-98599800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr3:98589800-98604000 Weak transcription Fetal Stomach stomach
30 chr3:98590000-98609600 Weak transcription Brain Anterior Caudate brain
31 chr3:98590400-98594000 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr3:98590800-98597000 Weak transcription Primary hematopoietic stem cells blood
33 chr3:98590800-98598600 Weak transcription HSMMtube muscle
34 chr3:98590800-98604600 Weak transcription H9 Cell Line embryonic stem cell
35 chr3:98591000-98598000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:98591000-98598600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr3:98591200-98597000 Weak transcription Fetal Lung lung
38 chr3:98591200-98599000 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:98591400-98593600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr3:98591400-98593600 Weak transcription NH-A brain
41 chr3:98591400-98594200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr3:98591400-98596400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr3:98591400-98596600 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr3:98591400-98596600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr3:98591400-98597200 Weak transcription Fetal Muscle Leg muscle
46 chr3:98591400-98598600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr3:98591400-98598600 Weak transcription Adipose Nuclei Adipose
48 chr3:98591400-98598600 Weak transcription Liver Liver
49 chr3:98591400-98598800 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr3:98591400-98602200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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