Variant report

Variant	rs2439222
Chromosome Location	chr3:98613773-98613774
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:98612045..98613776-chr3:98618564..98620858,2	MCF-7	breast:
2	chr3:98610185..98614055-chr3:98618710..98621878,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000239462	Chromatin interaction
ENSG00000057019	Chromatin interaction

Extended variants
information (count: 151 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:146)

rs_ID	r²[population]
rs1062196	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.80[TSI][hapmap]
rs1123293	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12054181	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12107050	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs12490832	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs1383905	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs14310	0.96[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs1440150	0.94[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap];0.81[ASN][1000 genomes]
rs1440151	0.83[JPT][hapmap]
rs1440153	0.92[GIH][hapmap]
rs1481634	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1481635	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1481636	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1481637	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17270986	0.82[CHB][hapmap];0.82[CHD][hapmap]
rs1837500	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1866677	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1866678	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1866679	0.83[EUR][1000 genomes]
rs1875086	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1967009	0.94[CHB][hapmap];0.87[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2028393	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2062059	0.94[CHB][hapmap];0.90[CHD][hapmap];0.87[JPT][hapmap];0.90[TSI][hapmap]
rs2119187	1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.80[TSI][hapmap];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2119188	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2128051	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2128054	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2246861	0.84[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.97[TSI][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2249740	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2262597	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2290067	0.96[CEU][hapmap];0.88[CHB][hapmap];0.96[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes]
rs2334230	0.92[GIH][hapmap];0.86[JPT][hapmap];0.81[MEX][hapmap]
rs2439213	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2439214	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2439215	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2439217	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2439218	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2439220	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2439223	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2439224	0.82[CHB][hapmap];0.82[CHD][hapmap];0.81[ASN][1000 genomes]
rs2439225	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2439226	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2439228	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2439229	0.80[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2439231	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2439236	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2439237	0.83[CHB][hapmap]
rs2449001	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2449039	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2449040	0.84[CEU][hapmap];0.94[CHB][hapmap];0.93[JPT][hapmap];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2449041	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2449042	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2449063	1.00[JPT][hapmap]
rs2454673	1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.82[TSI][hapmap];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2454676	0.90[ASN][1000 genomes]
rs2454677	0.91[ASN][1000 genomes]
rs2454678	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2454680	0.85[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2454682	0.96[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2454684	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2454685	0.92[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2454686	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2454691	0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2462234	1.00[JPT][hapmap];0.83[TSI][hapmap]
rs2462235	1.00[JPT][hapmap]
rs2462237	1.00[JPT][hapmap]
rs2462239	1.00[JPT][hapmap];0.83[TSI][hapmap]
rs2470759	1.00[JPT][hapmap]
rs2470761	1.00[JPT][hapmap]
rs2470821	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470822	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470823	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470824	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470825	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470826	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470845	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2470851	0.86[ASN][1000 genomes]
rs2470857	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2470859	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2470860	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2470861	0.93[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2470864	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2470865	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2470867	1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.80[TSI][hapmap];0.87[ASN][1000 genomes]
rs2470869	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2470876	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2470879	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2470881	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2470885	1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.82[TSI][hapmap];0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs28608112	0.83[ASN][1000 genomes]
rs28802000	0.81[ASN][1000 genomes]
rs2919236	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2929490	0.83[EUR][1000 genomes]
rs2960190	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34234373	0.81[ASN][1000 genomes]
rs34558202	0.81[ASN][1000 genomes]
rs3755574	0.96[CEU][hapmap];0.88[CHB][hapmap];0.92[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap]
rs3755576	0.88[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap]
rs3772099	0.84[JPT][hapmap]
rs3772102	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs3821359	0.86[JPT][hapmap]
rs4425200	0.96[CEU][hapmap];0.88[CHB][hapmap];0.96[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes]
rs4425201	0.88[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.82[TSI][hapmap]
rs4426625	0.96[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs4426626	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs4450736	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4494869	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs62276887	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6440280	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6782630	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs6785935	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.84[TSI][hapmap];0.81[ASN][1000 genomes]
rs6788418	0.81[ASN][1000 genomes]
rs6788689	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6804850	0.91[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs704585	0.88[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap]
rs7431448	0.94[GIH][hapmap]
rs7611929	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs7612036	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs7616275	0.81[ASN][1000 genomes]
rs7630800	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7631624	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs828609	0.88[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap]
rs844160	0.86[JPT][hapmap]
rs9289683	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9289685	0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs9811305	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs9811449	0.96[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs9811860	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9814819	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9815226	0.95[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs9820384	0.81[ASN][1000 genomes]
rs9823430	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9835142	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9843214	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.82[TSI][hapmap]
rs9843864	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9845558	0.81[ASN][1000 genomes]
rs9849048	0.81[ASN][1000 genomes]
rs9852950	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9860216	0.81[ASN][1000 genomes]
rs9860264	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9866570	0.86[JPT][hapmap]
rs9867586	0.84[EUR][1000 genomes]
rs9873932	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs9883516	0.91[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]
rs9883537	0.96[CEU][hapmap];0.88[CHB][hapmap];0.96[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs999147	0.96[CEU][hapmap];0.88[CHB][hapmap];0.96[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv591065	chr3:98204198-98766326	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv1007140	chr3:98421229-99202458	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
3	nsv536663	chr3:98421229-99202458	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
4	nsv877214	chr3:98445324-98738006	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
5	nsv1007486	chr3:98597738-99249081	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs2439222	ST3GAL6	cis	parietal	SCAN
rs2439222	ZBTB11	cis	cerebellum	SCAN
rs2439222	ST3GAL6	cis	multi-tissue	Pritchard

Chromatin state (count:75 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:98593800-98619400	Weak transcription	Small Intestine	intestine
2	chr3:98594400-98616600	Weak transcription	Fetal Brain Male	brain
3	chr3:98597400-98619000	Weak transcription	Primary hematopoietic stem cells	blood
4	chr3:98599800-98618400	Weak transcription	Fetal Brain Female	brain
5	chr3:98600600-98618000	Weak transcription	Fetal Muscle Trunk	muscle
6	chr3:98600600-98618000	Weak transcription	Fetal Thymus	thymus
7	chr3:98604400-98614600	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr3:98605000-98618600	Weak transcription	Fetal Stomach	stomach
9	chr3:98606400-98618400	Weak transcription	Fetal Kidney	kidney
10	chr3:98606600-98618000	Transcr. at gene 5' and 3'	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr3:98608800-98614400	Enhancers	K562	blood
12	chr3:98609000-98615800	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr3:98609400-98613800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr3:98609800-98613800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr3:98609800-98614200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr3:98610400-98615000	Transcr. at gene 5' and 3'	Osteobl	bone
17	chr3:98610400-98615800	Transcr. at gene 5' and 3'	NH-A	brain
18	chr3:98610400-98616600	Transcr. at gene 5' and 3'	A549	lung
19	chr3:98610800-98614200	Enhancers	Right Ventricle	heart
20	chr3:98610800-98618400	Weak transcription	Brain Anterior Caudate	brain
21	chr3:98610800-98618400	Enhancers	Fetal Heart	heart
22	chr3:98610800-98618600	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr3:98611200-98617000	Weak transcription	Rectal Smooth Muscle	rectum
24	chr3:98611400-98618800	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr3:98611400-98619200	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr3:98611600-98616600	Weak transcription	Fetal Lung	lung
27	chr3:98611800-98618400	Weak transcription	Colon Smooth Muscle	Colon
28	chr3:98611800-98618600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
29	chr3:98612000-98614800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr3:98612000-98618800	Weak transcription	Psoas Muscle	Psoas
31	chr3:98612400-98615000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr3:98612600-98613800	Enhancers	Right Atrium	heart
33	chr3:98612600-98614200	Enhancers	Left Ventricle	heart
34	chr3:98612600-98614800	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr3:98612600-98615000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
36	chr3:98612600-98616000	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr3:98612600-98616000	Transcr. at gene 5' and 3'	HMEC	breast
38	chr3:98612600-98618400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr3:98612800-98614600	Enhancers	Ovary	ovary
40	chr3:98612800-98617400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
41	chr3:98612800-98618400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr3:98613000-98616000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr3:98613000-98616200	Transcr. at gene 5' and 3'	Muscle Satellite Cultured Cells	--
44	chr3:98613000-98617600	Weak transcription	Adipose Nuclei	Adipose
45	chr3:98613000-98618400	Weak transcription	GM12878-XiMat	blood
46	chr3:98613000-98618600	Weak transcription	H9 Cell Line	embryonic stem cell
47	chr3:98613000-98618600	Weak transcription	Fetal Muscle Leg	muscle
48	chr3:98613000-98618600	Weak transcription	HSMMtube	muscle
49	chr3:98613200-98614000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr3:98613200-98614000	Weak transcription	Gastric	stomach

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