Variant report

Variant rs2449042
Chromosome Location chr3:98701828-98701829
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98697200-98705000 Weak transcription HSMMtube muscle
2 chr3:98699600-98703200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr3:98699800-98702000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:98699800-98704200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
5 chr3:98700000-98703200 Enhancers Cortex derived primary cultured neurospheres brain
6 chr3:98700000-98705600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:98700200-98702000 Active TSS A549 lung
8 chr3:98700200-98702000 Active TSS HMEC breast
9 chr3:98700200-98702400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:98700200-98702600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr3:98700400-98702000 Active TSS NHLF lung
12 chr3:98700400-98702600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr3:98700400-98702600 Weak transcription NHEK skin
14 chr3:98700400-98703400 Weak transcription HUVEC blood vessel
15 chr3:98700400-98704000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:98700800-98704800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:98701000-98705600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr3:98701200-98702200 Enhancers Brain Hippocampus Middle brain
19 chr3:98701200-98702200 Enhancers Brain Substantia Nigra brain
20 chr3:98701200-98703200 Flanking Active TSS NH-A brain
21 chr3:98701400-98702000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr3:98701400-98702800 Enhancers Brain Germinal Matrix brain
23 chr3:98701600-98702000 Enhancers Osteobl bone
24 chr3:98701600-98702200 Enhancers Brain Angular Gyrus brain
25 chr3:98701600-98702400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr3:98701600-98702400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:98701600-98702600 Enhancers Muscle Satellite Cultured Cells --
28 chr3:98701600-98704200 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr3:98701600-98704600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:98701600-98706200 Enhancers NHDF-Ad bronchial
31 chr3:98701800-98702000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr3:98701800-98702200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr3:98701800-98702800 Strong transcription HSMM muscle
34 chr3:98701800-98704000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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