Variant report

Variant rs1837500
Chromosome Location chr3:98612653-98612654
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98593800-98619400 Weak transcription Small Intestine intestine
2 chr3:98594400-98616600 Weak transcription Fetal Brain Male brain
3 chr3:98597400-98619000 Weak transcription Primary hematopoietic stem cells blood
4 chr3:98599800-98618400 Weak transcription Fetal Brain Female brain
5 chr3:98600600-98613000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr3:98600600-98618000 Weak transcription Fetal Muscle Trunk muscle
7 chr3:98600600-98618000 Weak transcription Fetal Thymus thymus
8 chr3:98602200-98613600 Genic enhancers HSMM muscle
9 chr3:98602400-98613600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:98604000-98613000 Enhancers NHLF lung
11 chr3:98604400-98614600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:98605000-98618600 Weak transcription Fetal Stomach stomach
13 chr3:98606400-98618400 Weak transcription Fetal Kidney kidney
14 chr3:98606600-98618000 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:98608800-98614400 Enhancers K562 blood
16 chr3:98609000-98612800 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr3:98609000-98613200 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr3:98609000-98615800 Enhancers HUES64 Cell Line embryonic stem cell
19 chr3:98609200-98613400 Enhancers Breast Myoepithelial Primary Cells Breast
20 chr3:98609400-98613400 Enhancers HUES6 Cell Line embryonic stem cell
21 chr3:98609400-98613800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr3:98609600-98613400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:98609800-98613800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr3:98609800-98614200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr3:98610000-98612800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr3:98610400-98615000 Transcr. at gene 5' and 3' Osteobl bone
27 chr3:98610400-98615800 Transcr. at gene 5' and 3' NH-A brain
28 chr3:98610400-98616600 Transcr. at gene 5' and 3' A549 lung
29 chr3:98610600-98613400 Enhancers Cortex derived primary cultured neurospheres brain
30 chr3:98610800-98614200 Enhancers Right Ventricle heart
31 chr3:98610800-98618400 Weak transcription Brain Anterior Caudate brain
32 chr3:98610800-98618400 Enhancers Fetal Heart heart
33 chr3:98610800-98618600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr3:98611000-98613200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:98611000-98613200 Enhancers HepG2 liver
36 chr3:98611200-98613400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr3:98611200-98617000 Weak transcription Rectal Smooth Muscle rectum
38 chr3:98611400-98612800 Weak transcription H1 Cell Line embryonic stem cell
39 chr3:98611400-98618800 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr3:98611400-98619200 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr3:98611600-98613000 Enhancers Adipose Nuclei Adipose
42 chr3:98611600-98616600 Weak transcription Fetal Lung lung
43 chr3:98611800-98612800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr3:98611800-98613200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:98611800-98613400 Genic enhancers HUVEC blood vessel
46 chr3:98611800-98618400 Weak transcription Colon Smooth Muscle Colon
47 chr3:98611800-98618600 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr3:98612000-98612800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr3:98612000-98612800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:98612000-98612800 Weak transcription iPS-20b Cell Line embryonic stem cell

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