Variant report

Variant	rs2470857
Chromosome Location	chr3:98595710-98595711
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:98594610..98596624-chr3:98619019..98621627,2	K562	blood:
2	chr3:98595066..98597311-chr3:98599043..98600864,2	K562	blood:
3	chr3:98595385..98598220-chr3:98601282..98604965,3	K562	blood:

Variant related genes	Relation type
ENSG00000239462	Chromatin interaction
ENSG00000057019	Chromatin interaction

Extended variants
information (count: 163 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:157)

rs_ID	r²[population]
rs1062196	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1123293	0.82[ASN][1000 genomes]
rs12054181	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12107050	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[EUR][1000 genomes]
rs12330170	0.86[EUR][1000 genomes]
rs12490832	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.86[EUR][1000 genomes]
rs13060012	0.86[EUR][1000 genomes]
rs1383905	0.82[ASN][1000 genomes]
rs14310	0.94[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.81[ASN][1000 genomes]
rs1440150	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1440151	0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs1440152	0.88[CEU][hapmap];0.81[JPT][hapmap];0.83[EUR][1000 genomes]
rs1481634	0.82[ASN][1000 genomes]
rs1481635	0.82[ASN][1000 genomes]
rs1481636	0.82[ASN][1000 genomes]
rs1481637	0.82[ASN][1000 genomes]
rs17270593	0.85[EUR][1000 genomes]
rs17270986	0.82[CHB][hapmap]
rs1837500	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1866677	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs1866678	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs1866679	0.83[ASN][1000 genomes]
rs1875086	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1967009	0.94[CHB][hapmap];0.87[JPT][hapmap];0.82[ASN][1000 genomes]
rs2028393	0.87[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2062059	0.94[CHB][hapmap];0.87[JPT][hapmap]
rs2119187	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2119188	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.87[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2128051	0.82[ASN][1000 genomes]
rs2128054	0.82[ASN][1000 genomes]
rs2246861	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2249740	0.84[ASN][1000 genomes]
rs2262597	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2279761	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2290067	0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs2334230	1.00[CEU][hapmap];0.86[JPT][hapmap];0.84[EUR][1000 genomes]
rs2439213	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2439214	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2439215	0.96[ASN][1000 genomes]
rs2439217	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2439218	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2439220	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2439222	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2439223	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2439224	0.82[CHB][hapmap]
rs2439225	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2439226	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2439228	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2439229	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2439231	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2439236	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2439237	0.88[CHB][hapmap]
rs2449001	0.82[ASN][1000 genomes]
rs2449039	0.82[ASN][1000 genomes]
rs2449040	0.94[CHB][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs2449041	0.82[ASN][1000 genomes]
rs2449042	0.82[ASN][1000 genomes]
rs2449063	1.00[JPT][hapmap]
rs2454673	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2454676	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2454677	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2454678	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2454680	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2454682	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2454684	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2454685	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2454686	0.85[ASN][1000 genomes]
rs2454691	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2462234	1.00[JPT][hapmap]
rs2462235	1.00[JPT][hapmap]
rs2462237	1.00[JPT][hapmap]
rs2462239	1.00[JPT][hapmap]
rs2470759	1.00[JPT][hapmap]
rs2470761	1.00[JPT][hapmap]
rs2470821	0.82[ASN][1000 genomes]
rs2470822	0.82[ASN][1000 genomes]
rs2470823	0.82[ASN][1000 genomes]
rs2470824	0.82[ASN][1000 genomes]
rs2470825	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2470826	0.82[ASN][1000 genomes]
rs2470851	0.82[ASN][1000 genomes]
rs2470859	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2470860	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2470861	0.95[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2470864	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2470865	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2470867	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2470869	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2470876	0.82[ASN][1000 genomes]
rs2470879	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2470881	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.87[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2470885	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28802000	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2919236	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2960190	0.91[ASN][1000 genomes]
rs34234373	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34558202	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3755574	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs3755576	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs3772098	1.00[CEU][hapmap];0.81[JPT][hapmap];0.84[EUR][1000 genomes]
rs3772099	1.00[CEU][hapmap];0.85[JPT][hapmap];0.84[EUR][1000 genomes]
rs3772101	0.85[EUR][1000 genomes]
rs3772102	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[EUR][1000 genomes]
rs3821359	1.00[CEU][hapmap];0.86[JPT][hapmap];0.84[EUR][1000 genomes]
rs4269027	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4425200	0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs4425201	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.86[EUR][1000 genomes]
rs4426625	0.88[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap]
rs4426626	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.86[EUR][1000 genomes]
rs4450736	0.87[ASN][1000 genomes]
rs4494869	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.86[EUR][1000 genomes]
rs62276887	0.82[ASN][1000 genomes]
rs62278486	0.86[EUR][1000 genomes]
rs6440280	0.82[ASN][1000 genomes]
rs6782630	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.81[ASN][1000 genomes]
rs6785935	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6788418	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6788689	0.85[ASN][1000 genomes]
rs6790650	0.85[EUR][1000 genomes]
rs6793760	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6804850	0.88[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap]
rs6808116	0.84[EUR][1000 genomes]
rs704585	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs7431448	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs7611929	0.92[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[EUR][1000 genomes]
rs7612036	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[EUR][1000 genomes]
rs7612605	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7616275	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7630800	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7631624	0.82[ASN][1000 genomes]
rs828609	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs844160	0.96[CEU][hapmap];0.87[JPT][hapmap];0.83[EUR][1000 genomes]
rs9289683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9289685	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9811305	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs9811449	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs9811860	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9814819	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.85[ASN][1000 genomes]
rs9815226	0.88[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap]
rs9820384	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9823430	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9835142	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9843214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs9843864	0.81[ASN][1000 genomes]
rs9845558	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9852950	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9860216	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9860264	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs9866570	1.00[CEU][hapmap];0.87[JPT][hapmap];0.84[EUR][1000 genomes]
rs9867586	0.80[ASN][1000 genomes]
rs9872152	0.84[EUR][1000 genomes]
rs9873932	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9878392	0.84[EUR][1000 genomes]
rs9881519	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9883516	0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs9883537	0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs999147	0.88[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv591065	chr3:98204198-98766326	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv1007140	chr3:98421229-99202458	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
3	nsv536663	chr3:98421229-99202458	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
4	nsv877214	chr3:98445324-98738006	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
5	nsv1009032	chr3:98514221-98607721	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
6	esv3441569	chr3:98585311-98607020	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2470857	ST3GAL6	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:98567600-98601000	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr3:98575400-98603800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr3:98575800-98603200	Weak transcription	Colon Smooth Muscle	Colon
4	chr3:98575800-98603800	Weak transcription	Stomach Smooth Muscle	stomach
5	chr3:98576000-98598600	Weak transcription	Fetal Kidney	kidney
6	chr3:98577200-98598800	Weak transcription	Left Ventricle	heart
7	chr3:98578000-98601000	Weak transcription	Lung	lung
8	chr3:98583400-98611400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr3:98584400-98607200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr3:98584600-98604200	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr3:98586200-98595800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr3:98586600-98598600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr3:98587200-98596200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr3:98587200-98604600	Weak transcription	Ovary	ovary
15	chr3:98587800-98601800	Strong transcription	HSMM	muscle
16	chr3:98589000-98598600	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr3:98589200-98602200	Weak transcription	NHLF	lung
18	chr3:98589400-98598800	Weak transcription	Fetal Muscle Trunk	muscle
19	chr3:98589400-98609200	Weak transcription	Fetal Intestine Large	intestine
20	chr3:98589600-98597000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr3:98589600-98599800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr3:98589800-98604000	Weak transcription	Fetal Stomach	stomach
23	chr3:98590000-98609600	Weak transcription	Brain Anterior Caudate	brain
24	chr3:98590800-98597000	Weak transcription	Primary hematopoietic stem cells	blood
25	chr3:98590800-98598600	Weak transcription	HSMMtube	muscle
26	chr3:98590800-98604600	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr3:98591000-98598000	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr3:98591000-98598600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr3:98591200-98597000	Weak transcription	Fetal Lung	lung
30	chr3:98591200-98599000	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr3:98591400-98596400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr3:98591400-98596600	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr3:98591400-98596600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr3:98591400-98597200	Weak transcription	Fetal Muscle Leg	muscle
35	chr3:98591400-98598600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr3:98591400-98598600	Weak transcription	Adipose Nuclei	Adipose
37	chr3:98591400-98598600	Weak transcription	Liver	Liver
38	chr3:98591400-98598800	Weak transcription	Sigmoid Colon	Sigmoid Colon
39	chr3:98591400-98602200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr3:98591400-98604200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr3:98591600-98598600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr3:98591600-98600000	Weak transcription	Dnd41	blood
43	chr3:98591600-98604600	Weak transcription	Aorta	Aorta
44	chr3:98592000-98597600	Strong transcription	NHDF-Ad	bronchial
45	chr3:98592000-98598600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr3:98592600-98604600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr3:98593000-98598800	Weak transcription	Cortex derived primary cultured neurospheres	brain
48	chr3:98593200-98599200	Weak transcription	Fetal Brain Female	brain
49	chr3:98593400-98597600	Enhancers	Fetal Heart	heart
50	chr3:98593600-98597200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links