Variant report

Variant	rs706406
Chromosome Location	chr1:56627288-56627289
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1149640	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1149643	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12116494	0.84[EUR][1000 genomes]
rs12144217	0.84[EUR][1000 genomes]
rs1230003	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1230004	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1230005	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1304824	0.86[EUR][1000 genomes]
rs61595371	0.80[EUR][1000 genomes]
rs706405	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72675569	0.87[EUR][1000 genomes]
rs778124	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778386	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs706406	DMRTB1	cis	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56625000-56633000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:56625200-56628000	Weak transcription	Right Atrium	heart
3	chr1:56625400-56633000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:56625600-56636200	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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