Variant report

(count:20 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	IRF1	chr10:50399427-50399621	K562	blood:	n/a	n/a
2	TBP	chr10:50398140-50399662	GM12878	blood:	n/a	n/a
3	SPI1	chr10:50399461-50399687	GM12878	blood:	n/a	n/a
4	TBL1XR1	chr10:50399252-50399747	GM12878	blood:	n/a	n/a
5	RELA	chr10:50397978-50399628	GM19099	blood:	n/a	n/a
6	MXI1	chr10:50398825-50399713	GM12878	blood:	n/a	n/a
7	NFYB	chr10:50399417-50399700	GM12878	blood:	n/a	n/a
8	EP300	chr10:50399380-50399754	GM12878	blood:	n/a	n/a
9	IKZF1	chr10:50399359-50399660	GM12878	blood:	n/a	n/a
10	ZNF384	chr10:50398304-50399841	GM12878	blood:	n/a	n/a
11	CUX1	chr10:50399382-50399669	GM12878	blood:	n/a	n/a
12	IRF1	chr10:50399255-50399533	K562	blood:	n/a	n/a
13	EP300	chr10:50399376-50399729	GM12878	blood:	n/a	n/a
14	SPI1	chr10:50399421-50399731	GM12891	blood:	n/a	n/a
15	SPI1	chr10:50399452-50399739	GM12891	blood:	n/a	n/a
16	EP300	chr10:50399263-50399852	GM12878	blood:	n/a	n/a
17	BHLHE40	chr10:50399371-50399752	GM12878	blood:	n/a	n/a
18	SPI1	chr10:50399229-50399764	GM12878	blood:	n/a	n/a
19	SPI1	chr10:50399418-50399754	GM12878	blood:	n/a	n/a
20	ZNF143	chr10:50399493-50399600	GM12878	blood:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:50399505..50401481-chr10:50433007..50435119,2	K562	blood:

No data

Variant related genes	Relation type
C10orf128	TF binding region

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10745252	1.00[ASN][1000 genomes]
rs10776546	1.00[ASN][1000 genomes]
rs10857443	1.00[ASN][1000 genomes]
rs10857445	1.00[ASN][1000 genomes]
rs11593489	1.00[ASN][1000 genomes]
rs2002392	1.00[ASN][1000 genomes]
rs2377950	1.00[ASN][1000 genomes]
rs2377951	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377952	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377985	1.00[ASN][1000 genomes]
rs2377987	1.00[ASN][1000 genomes]
rs2377991	1.00[ASN][1000 genomes]
rs2377992	1.00[ASN][1000 genomes]
rs2889807	1.00[ASN][1000 genomes]
rs4514329	1.00[ASN][1000 genomes]
rs4838372	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4838465	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61748312	0.83[EUR][1000 genomes]
rs6537509	1.00[ASN][1000 genomes]
rs6537510	1.00[ASN][1000 genomes]
rs7394346	1.00[ASN][1000 genomes]
rs7893648	1.00[ASN][1000 genomes]
rs7906560	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7912808	1.00[ASN][1000 genomes]
rs7922135	1.00[ASN][1000 genomes]
rs7923767	1.00[ASN][1000 genomes]
rs9645532	1.00[ASN][1000 genomes]
rs9645533	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50397000-50399600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr10:50397000-50401600	Weak transcription	HUVEC	blood vessel
3	chr10:50398600-50399800	Enhancers	Primary B cells from cord blood	blood
4	chr10:50398600-50400000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr10:50398600-50402600	Weak transcription	Right Atrium	heart
6	chr10:50398600-50403400	Weak transcription	Spleen	Spleen
7	chr10:50399000-50399600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
8	chr10:50399200-50399600	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr10:50399200-50400000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
10	chr10:50399200-50402400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:50399200-50402400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:50399200-50404600	Weak transcription	K562	blood
13	chr10:50399400-50400000	Enhancers	GM12878-XiMat	blood
14	chr10:50399400-50401800	Weak transcription	Primary B cells from peripheral blood	blood
15	chr10:50399400-50402400	Weak transcription	Primary neutrophils fromperipheralblood	blood

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