Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:50448759..50451494-chr10:50463430..50466103,2	K562	blood:
2	chr10:50446994..50449831-chr10:50450885..50453374,2	K562	blood:
3	chr10:50446413..50449430-chr10:50451528..50453716,3	K562	blood:
4	chr10:50443853..50446189-chr10:50448741..50451708,2	K562	blood:
5	chr10:50445084..50446757-chr10:50448279..50449919,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10745252	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10776546	1.00[ASN][1000 genomes]
rs10857443	1.00[ASN][1000 genomes]
rs10857445	0.81[ASW][hapmap];0.81[LWK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10857447	0.91[AFR][1000 genomes]
rs11593489	1.00[ASN][1000 genomes]
rs2377950	1.00[ASN][1000 genomes]
rs2377951	1.00[ASN][1000 genomes]
rs2377952	1.00[ASN][1000 genomes]
rs2377985	0.86[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2377987	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377991	1.00[ASN][1000 genomes]
rs2377992	1.00[ASN][1000 genomes]
rs2889807	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4514329	1.00[ASN][1000 genomes]
rs4838372	1.00[ASN][1000 genomes]
rs4838465	1.00[ASN][1000 genomes]
rs6537509	1.00[ASN][1000 genomes]
rs6537510	1.00[ASN][1000 genomes]
rs7094605	1.00[ASN][1000 genomes]
rs7394346	1.00[ASN][1000 genomes]
rs7893648	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7906560	1.00[ASN][1000 genomes]
rs7912808	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7922135	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7923767	1.00[ASN][1000 genomes]
rs9645532	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9645533	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50445200-50449800	Weak transcription	K562	blood
2	chr10:50445600-50450200	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr10:50447600-50452400	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr10:50447600-50453000	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr10:50447800-50450000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr10:50448400-50449600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr10:50448400-50449800	Enhancers	Primary hematopoietic stem cells	blood
8	chr10:50448600-50449400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
9	chr10:50448800-50449400	Enhancers	HSMMtube	muscle
10	chr10:50448800-50450400	Enhancers	Fetal Stomach	stomach
11	chr10:50449000-50449200	Enhancers	Liver	Liver
12	chr10:50449000-50451000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
13	chr10:50449000-50451000	Enhancers	Fetal Muscle Trunk	muscle
14	chr10:50449000-50451200	Enhancers	Fetal Muscle Leg	muscle
15	chr10:50449000-50451400	Enhancers	Left Ventricle	heart
16	chr10:50449000-50451400	Enhancers	Right Atrium	heart
17	chr10:50449000-50451600	Enhancers	Fetal Heart	heart
18	chr10:50449000-50451600	Enhancers	Right Ventricle	heart

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