Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:50393958..50396203-chr10:50431601..50433685,2	K562	blood:
2	chr10:50433140..50435139-chr10:50443341..50445779,2	K562	blood:
3	chr10:50399505..50401481-chr10:50433007..50435119,2	K562	blood:
4	chr10:50433539..50435257-chr10:50436975..50439203,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10745252	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10776546	1.00[ASN][1000 genomes]
rs10857443	1.00[ASN][1000 genomes]
rs10857445	1.00[ASN][1000 genomes]
rs11593489	1.00[ASN][1000 genomes]
rs2002392	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377950	1.00[ASN][1000 genomes]
rs2377951	1.00[ASN][1000 genomes]
rs2377952	1.00[ASN][1000 genomes]
rs2377985	1.00[ASN][1000 genomes]
rs2377987	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2377991	1.00[ASN][1000 genomes]
rs2377992	1.00[ASN][1000 genomes]
rs2889807	1.00[ASN][1000 genomes]
rs4514329	1.00[ASN][1000 genomes]
rs4838372	1.00[ASN][1000 genomes]
rs4838465	1.00[ASN][1000 genomes]
rs6537509	1.00[ASN][1000 genomes]
rs6537510	1.00[ASN][1000 genomes]
rs7094605	1.00[ASN][1000 genomes]
rs7394346	1.00[ASN][1000 genomes]
rs7893648	1.00[ASN][1000 genomes]
rs7906560	1.00[ASN][1000 genomes]
rs7912808	1.00[ASN][1000 genomes]
rs7922135	1.00[ASN][1000 genomes]
rs7923767	1.00[ASN][1000 genomes]
rs9645533	0.97[AFR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50429800-50433600	Weak transcription	Right Ventricle	heart
2	chr10:50432600-50434200	Enhancers	Fetal Heart	heart
3	chr10:50433000-50434200	Flanking Active TSS	K562	blood
4	chr10:50433200-50434000	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr10:50433200-50434800	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr10:50433400-50433600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr10:50433400-50433600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
8	chr10:50433400-50433800	Enhancers	Right Atrium	heart
9	chr10:50433400-50433800	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr10:50433400-50434200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
11	chr10:50433400-50434200	Enhancers	Left Ventricle	heart

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