Variant report

Variant	rs7105867
Chromosome Location	chr11:26287657-26287658
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 78 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:77)

rs_ID	r²[population]
rs10501044	0.81[ASN][1000 genomes]
rs1072987	0.89[ASN][1000 genomes]
rs10834934	0.85[ASN][1000 genomes]
rs10834935	0.85[ASN][1000 genomes]
rs10834936	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10834937	0.81[ASN][1000 genomes]
rs10834938	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10834939	0.85[ASN][1000 genomes]
rs10834940	0.85[ASN][1000 genomes]
rs10834941	0.85[ASN][1000 genomes]
rs10834942	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10834943	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10834946	0.85[ASN][1000 genomes]
rs10834947	0.83[ASN][1000 genomes]
rs10834948	0.83[ASN][1000 genomes]
rs10834949	0.85[ASN][1000 genomes]
rs10834950	0.85[ASN][1000 genomes]
rs10834951	0.85[ASN][1000 genomes]
rs10834952	0.83[ASN][1000 genomes]
rs10834961	0.81[ASN][1000 genomes]
rs11029449	0.85[ASN][1000 genomes]
rs11029450	0.85[ASN][1000 genomes]
rs11029451	0.85[ASN][1000 genomes]
rs11029452	0.87[ASN][1000 genomes]
rs11029453	0.89[ASN][1000 genomes]
rs11029454	0.89[ASN][1000 genomes]
rs11029455	0.89[ASN][1000 genomes]
rs11029456	0.89[ASN][1000 genomes]
rs11029460	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11029463	0.85[ASN][1000 genomes]
rs11029464	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11029465	0.85[ASN][1000 genomes]
rs11029467	0.85[ASN][1000 genomes]
rs11029468	0.85[ASN][1000 genomes]
rs11029469	0.81[ASN][1000 genomes]
rs11029470	0.85[ASN][1000 genomes]
rs11029472	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11029474	0.85[ASN][1000 genomes]
rs11029475	0.85[ASN][1000 genomes]
rs11029476	0.83[ASN][1000 genomes]
rs11029477	0.85[ASN][1000 genomes]
rs11029478	0.85[ASN][1000 genomes]
rs11029479	0.85[ASN][1000 genomes]
rs11029501	0.81[ASN][1000 genomes]
rs11029502	0.81[ASN][1000 genomes]
rs11029508	0.81[ASN][1000 genomes]
rs11029510	0.81[ASN][1000 genomes]
rs11822673	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11824243	0.85[ASN][1000 genomes]
rs11824306	0.85[ASN][1000 genomes]
rs11825099	0.85[ASN][1000 genomes]
rs12222745	0.89[ASN][1000 genomes]
rs12223352	0.81[ASN][1000 genomes]
rs12223851	0.85[ASN][1000 genomes]
rs12224075	0.89[ASN][1000 genomes]
rs12226827	0.89[ASN][1000 genomes]
rs12226840	0.89[ASN][1000 genomes]
rs12226854	0.89[ASN][1000 genomes]
rs12271561	0.83[ASN][1000 genomes]
rs12275831	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12278192	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1461393	0.85[ASN][1000 genomes]
rs1841572	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34019155	0.81[ASN][1000 genomes]
rs34362229	0.81[ASN][1000 genomes]
rs35215165	0.85[ASN][1000 genomes]
rs35624765	0.81[ASN][1000 genomes]
rs4420218	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55993533	0.85[ASN][1000 genomes]
rs59132731	0.85[ASN][1000 genomes]
rs60193609	0.85[ASN][1000 genomes]
rs6484200	0.81[ASN][1000 genomes]
rs7930530	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7938680	0.81[ASN][1000 genomes]
rs7942458	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7945497	0.85[ASN][1000 genomes]
rs7949962	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832094	chr11:26130733-26292782	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26275800-26290600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr11:26286000-26306200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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