Variant report

Variant	rs10834952
Chromosome Location	chr11:26306407-26306408
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 111 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:111)

rs_ID	r²[population]
rs10501044	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10501046	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1072987	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10767517	0.90[ASN][1000 genomes]
rs10834934	0.98[ASN][1000 genomes]
rs10834935	0.98[ASN][1000 genomes]
rs10834936	0.98[ASN][1000 genomes]
rs10834937	0.94[ASN][1000 genomes]
rs10834938	0.98[ASN][1000 genomes]
rs10834939	0.98[ASN][1000 genomes]
rs10834940	0.98[ASN][1000 genomes]
rs10834941	0.98[ASN][1000 genomes]
rs10834942	0.98[ASN][1000 genomes]
rs10834943	0.98[ASN][1000 genomes]
rs10834945	0.84[ASN][1000 genomes]
rs10834946	0.98[ASN][1000 genomes]
rs10834947	0.96[ASN][1000 genomes]
rs10834948	0.96[ASN][1000 genomes]
rs10834949	0.98[ASN][1000 genomes]
rs10834950	0.98[ASN][1000 genomes]
rs10834951	0.98[ASN][1000 genomes]
rs10834961	0.94[ASN][1000 genomes]
rs10834962	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029447	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11029448	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11029449	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11029450	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11029451	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11029452	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029453	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029454	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029455	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029456	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029460	0.98[ASN][1000 genomes]
rs11029463	0.98[ASN][1000 genomes]
rs11029464	0.98[ASN][1000 genomes]
rs11029465	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029467	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029468	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029469	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029470	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029472	0.90[ASN][1000 genomes]
rs11029473	0.88[ASN][1000 genomes]
rs11029474	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029475	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029476	0.96[ASN][1000 genomes]
rs11029477	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029478	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029479	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029501	0.94[ASN][1000 genomes]
rs11029502	0.94[ASN][1000 genomes]
rs11029508	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029510	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029514	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029515	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029516	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029517	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029518	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029519	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11029522	0.86[ASN][1000 genomes]
rs11029526	0.81[ASN][1000 genomes]
rs11820185	0.80[AFR][1000 genomes]
rs11822673	0.90[ASN][1000 genomes]
rs11824243	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11824253	0.96[AFR][1000 genomes]
rs11824306	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11824431	0.81[AFR][1000 genomes]
rs11825099	0.90[ASN][1000 genomes]
rs11826876	0.81[AFR][1000 genomes]
rs12049824	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12221994	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12222745	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12223352	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12223726	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12223851	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12224038	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12224075	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12226827	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12226840	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12226854	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12271557	0.82[ASN][1000 genomes]
rs12271561	0.96[ASN][1000 genomes]
rs12275831	0.98[ASN][1000 genomes]
rs12278192	0.90[ASN][1000 genomes]
rs12284961	0.82[ASN][1000 genomes]
rs12291807	0.82[ASN][1000 genomes]
rs1461393	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16915436	0.82[AFR][1000 genomes]
rs16915437	0.80[AFR][1000 genomes]
rs16915466	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1841572	0.94[ASN][1000 genomes]
rs1960495	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34019155	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34362229	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34411356	0.87[AFR][1000 genomes]
rs35215165	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35624765	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4420218	0.98[ASN][1000 genomes]
rs55993533	0.98[ASN][1000 genomes]
rs59132731	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60193609	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60646514	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60811682	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6484200	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7105867	0.83[ASN][1000 genomes]
rs7930530	0.98[ASN][1000 genomes]
rs7938680	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7942458	0.98[ASN][1000 genomes]
rs7945497	0.98[ASN][1000 genomes]
rs7949962	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs898735	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26305600-26306600	Active TSS	Brain Anterior Caudate	brain
2	chr11:26305800-26306600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
3	chr11:26305800-26306600	Active TSS	iPS-18 Cell Line	embryonic stem cell
4	chr11:26305800-26306600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:26305800-26306600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr11:26305800-26306600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr11:26305800-26306600	Active TSS	Adipose Nuclei	Adipose
8	chr11:26305800-26306600	Active TSS	Brain Inferior Temporal Lobe	brain
9	chr11:26305800-26306600	Active TSS	NH-A	brain
10	chr11:26305800-26306600	Active TSS	NHLF	lung
11	chr11:26305800-26306800	Active TSS	iPS-20b Cell Line	embryonic stem cell
12	chr11:26306000-26306600	Active TSS	ES-I3 Cell Line	embryonic stem cell
13	chr11:26306000-26306600	Active TSS	H1 Cell Line	embryonic stem cell
14	chr11:26306000-26306600	Active TSS	H9 Cell Line	embryonic stem cell
15	chr11:26306000-26306600	Active TSS	HUES6 Cell Line	embryonic stem cell
16	chr11:26306000-26306600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr11:26306000-26306600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr11:26306000-26306600	Active TSS	Primary T cells from cord blood	blood
19	chr11:26306000-26306600	Enhancers	Primary hematopoietic stem cells	blood
20	chr11:26306000-26306600	Active TSS	Muscle Satellite Cultured Cells	--
21	chr11:26306000-26306600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr11:26306000-26306600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr11:26306000-26306600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr11:26306000-26306600	Active TSS	Brain Cingulate Gyrus	brain
25	chr11:26306000-26306600	Active TSS	Brain Hippocampus Middle	brain
26	chr11:26306000-26306600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
27	chr11:26306000-26306600	Active TSS	Fetal Intestine Large	intestine
28	chr11:26306000-26306600	Active TSS	Fetal Kidney	kidney
29	chr11:26306000-26306600	Active TSS	Pancreatic Islets	Pancreatic Islet
30	chr11:26306000-26306600	Active TSS	Fetal Muscle Trunk	muscle
31	chr11:26306000-26306600	Active TSS	Fetal Muscle Leg	muscle
32	chr11:26306000-26306600	Active TSS	Fetal Stomach	stomach
33	chr11:26306000-26306600	Active TSS	Ovary	ovary
34	chr11:26306000-26306600	Active TSS	Psoas Muscle	Psoas
35	chr11:26306000-26306600	Active TSS	Right Ventricle	heart
36	chr11:26306000-26306600	Active TSS	NHDF-Ad	bronchial
37	chr11:26306000-26306600	Active TSS	NHEK	skin
38	chr11:26306000-26306600	Active TSS	Osteobl	bone
39	chr11:26306000-26306800	Active TSS	HUES48 Cell Line	embryonic stem cell
40	chr11:26306000-26306800	Active TSS	HUES64 Cell Line	embryonic stem cell
41	chr11:26306000-26306800	Active TSS	iPS-15b Cell Line	embryonic stem cell
42	chr11:26306000-26306800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr11:26306000-26306800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr11:26306000-26306800	Active TSS	Duodenum Smooth Muscle	Duodenum
45	chr11:26306000-26306800	Active TSS	Fetal Adrenal Gland	Adrenal Gland
46	chr11:26306000-26306800	Active TSS	A549	lung
47	chr11:26306000-26306800	Active TSS	HMEC	breast
48	chr11:26306000-26307400	Weak transcription	Fetal Heart	heart
49	chr11:26306200-26306600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
50	chr11:26306200-26306600	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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