Variant report

Variant	rs7938680
Chromosome Location	chr11:26319535-26319536
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:26317426..26320174-chr11:26322720..26325087,2	K562	blood:

Extended variants
information (count: 106 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:105)

rs_ID	r²[population]
rs10501044	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10501046	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1072987	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10767517	0.87[ASN][1000 genomes]
rs10834934	0.96[ASN][1000 genomes]
rs10834935	0.96[ASN][1000 genomes]
rs10834936	0.96[ASN][1000 genomes]
rs10834937	0.92[ASN][1000 genomes]
rs10834938	0.96[ASN][1000 genomes]
rs10834939	0.96[ASN][1000 genomes]
rs10834940	0.96[ASN][1000 genomes]
rs10834941	0.96[ASN][1000 genomes]
rs10834942	0.96[ASN][1000 genomes]
rs10834943	0.96[ASN][1000 genomes]
rs10834945	0.81[ASN][1000 genomes]
rs10834946	0.96[ASN][1000 genomes]
rs10834947	0.94[ASN][1000 genomes]
rs10834948	0.94[ASN][1000 genomes]
rs10834949	0.96[ASN][1000 genomes]
rs10834950	0.96[ASN][1000 genomes]
rs10834951	0.96[ASN][1000 genomes]
rs10834952	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10834961	1.00[ASN][1000 genomes]
rs10834962	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029370	0.85[CHB][hapmap]
rs11029371	0.85[CHB][hapmap]
rs11029447	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11029448	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11029449	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11029450	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11029451	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11029452	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11029453	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029454	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029455	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029456	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029460	0.96[ASN][1000 genomes]
rs11029463	0.96[ASN][1000 genomes]
rs11029464	0.96[ASN][1000 genomes]
rs11029465	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029467	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029468	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029469	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029470	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029472	0.87[ASN][1000 genomes]
rs11029473	0.86[ASN][1000 genomes]
rs11029474	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029475	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029476	0.94[ASN][1000 genomes]
rs11029477	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029478	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029479	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029483	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11029484	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11029501	1.00[ASN][1000 genomes]
rs11029502	1.00[ASN][1000 genomes]
rs11029508	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11029510	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11029514	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029515	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029516	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029517	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029518	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029519	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029522	1.00[CHB][hapmap];0.92[ASN][1000 genomes]
rs11029526	0.86[ASN][1000 genomes]
rs11822673	0.88[ASN][1000 genomes]
rs11824243	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11824306	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11825099	0.88[ASN][1000 genomes]
rs12049824	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12221994	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12222745	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12223352	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12223726	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12223851	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12224038	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12224075	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12226827	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12226840	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12226854	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12271561	0.94[ASN][1000 genomes]
rs12275831	0.96[ASN][1000 genomes]
rs12278192	0.88[ASN][1000 genomes]
rs1461393	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16915466	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1841572	0.92[ASN][1000 genomes]
rs1960495	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34019155	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34362229	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35215165	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35624765	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4420218	0.96[ASN][1000 genomes]
rs55993533	0.96[ASN][1000 genomes]
rs59132731	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60193609	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60646514	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60811682	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6484200	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7105867	0.81[ASN][1000 genomes]
rs7930530	0.96[ASN][1000 genomes]
rs7942458	0.96[ASN][1000 genomes]
rs7945497	0.96[ASN][1000 genomes]
rs7949962	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs898735	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425701	chr11:26310425-26330495	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26318600-26319600	Enhancers	Fetal Lung	lung
2	chr11:26319000-26319600	Enhancers	HUES48 Cell Line	embryonic stem cell

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