Variant report

Variant	rs11029484
Chromosome Location	chr11:26310834-26310835
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 111 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:109)

rs_ID	r²[population]
rs10501044	0.96[ASN][1000 genomes]
rs10501046	0.88[ASN][1000 genomes]
rs1072987	0.96[ASN][1000 genomes]
rs10767517	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10834934	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834935	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834936	1.00[ASN][1000 genomes]
rs10834937	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834938	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10834939	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834940	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834941	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834942	1.00[ASN][1000 genomes]
rs10834943	1.00[ASN][1000 genomes]
rs10834945	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10834946	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834947	0.98[ASN][1000 genomes]
rs10834948	0.98[ASN][1000 genomes]
rs10834949	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834950	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834951	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834952	0.98[ASN][1000 genomes]
rs10834961	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834962	0.88[ASN][1000 genomes]
rs11029370	0.85[CHB][hapmap]
rs11029371	0.85[CHB][hapmap]
rs11029447	0.83[ASN][1000 genomes]
rs11029448	0.83[ASN][1000 genomes]
rs11029449	0.92[ASN][1000 genomes]
rs11029450	0.92[ASN][1000 genomes]
rs11029451	0.92[ASN][1000 genomes]
rs11029452	0.94[ASN][1000 genomes]
rs11029453	0.96[ASN][1000 genomes]
rs11029454	0.96[ASN][1000 genomes]
rs11029455	0.96[ASN][1000 genomes]
rs11029456	0.96[ASN][1000 genomes]
rs11029460	1.00[ASN][1000 genomes]
rs11029463	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11029464	1.00[ASN][1000 genomes]
rs11029465	1.00[ASN][1000 genomes]
rs11029467	1.00[ASN][1000 genomes]
rs11029468	1.00[ASN][1000 genomes]
rs11029469	0.96[ASN][1000 genomes]
rs11029470	1.00[ASN][1000 genomes]
rs11029472	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11029473	0.90[ASN][1000 genomes]
rs11029474	1.00[ASN][1000 genomes]
rs11029475	1.00[ASN][1000 genomes]
rs11029476	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11029477	1.00[ASN][1000 genomes]
rs11029478	1.00[ASN][1000 genomes]
rs11029479	1.00[ASN][1000 genomes]
rs11029483	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11029501	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029502	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029508	0.96[ASN][1000 genomes]
rs11029510	0.96[ASN][1000 genomes]
rs11029514	0.88[ASN][1000 genomes]
rs11029515	0.88[ASN][1000 genomes]
rs11029516	0.88[ASN][1000 genomes]
rs11029517	0.88[ASN][1000 genomes]
rs11029518	0.88[ASN][1000 genomes]
rs11029519	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11029522	0.93[CEU][hapmap];1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11029526	0.82[ASN][1000 genomes]
rs11822673	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11824243	1.00[ASN][1000 genomes]
rs11824306	1.00[ASN][1000 genomes]
rs11825099	0.92[ASN][1000 genomes]
rs12049824	0.88[ASN][1000 genomes]
rs12221994	0.88[ASN][1000 genomes]
rs12222745	0.96[ASN][1000 genomes]
rs12223352	0.96[ASN][1000 genomes]
rs12223726	0.88[ASN][1000 genomes]
rs12223851	0.92[ASN][1000 genomes]
rs12224038	0.88[ASN][1000 genomes]
rs12224075	0.96[ASN][1000 genomes]
rs12226827	0.96[ASN][1000 genomes]
rs12226840	0.96[ASN][1000 genomes]
rs12226854	0.96[ASN][1000 genomes]
rs12271557	0.83[ASN][1000 genomes]
rs12271561	0.81[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12275831	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12278192	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12284961	0.83[ASN][1000 genomes]
rs12291807	0.83[ASN][1000 genomes]
rs1461393	1.00[ASN][1000 genomes]
rs16915466	0.88[ASN][1000 genomes]
rs1841572	0.96[ASN][1000 genomes]
rs1960495	0.88[ASN][1000 genomes]
rs34019155	0.96[ASN][1000 genomes]
rs34362229	0.96[ASN][1000 genomes]
rs35215165	1.00[ASN][1000 genomes]
rs35624765	0.96[ASN][1000 genomes]
rs4420218	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55993533	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59132731	0.92[ASN][1000 genomes]
rs60193609	1.00[ASN][1000 genomes]
rs60646514	0.88[ASN][1000 genomes]
rs60811682	0.88[ASN][1000 genomes]
rs6484200	0.96[ASN][1000 genomes]
rs6484203	0.86[CEU][hapmap]
rs7105867	0.85[ASN][1000 genomes]
rs7930530	1.00[ASN][1000 genomes]
rs7938680	0.96[ASN][1000 genomes]
rs7942458	1.00[ASN][1000 genomes]
rs7945497	1.00[ASN][1000 genomes]
rs7949962	1.00[ASN][1000 genomes]
rs898735	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3351501	chr11:26310376-26312374	Inactive region	TF binding region	1 gene(s)	inside rSNPs	diseases
2	esv3425701	chr11:26310425-26330495	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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