Variant report

Variant	rs11029502
Chromosome Location	chr11:26319096-26319097
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:26318438..26319350-chr11:26670793..26671982,7	MCF-7	breast:
2	chr11:26317426..26320174-chr11:26322720..26325087,2	K562	blood:
3	chr11:26318636..26319225-chr11:26543911..26544770,2	MCF-7	breast:

Extended variants
information (count: 110 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:109)

rs_ID	r²[population]
rs10501044	1.00[ASN][1000 genomes]
rs10501046	0.92[ASN][1000 genomes]
rs1072987	0.92[ASN][1000 genomes]
rs10767517	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10834934	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834935	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834936	0.96[ASN][1000 genomes]
rs10834937	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10834938	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10834939	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834940	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834941	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834942	0.96[ASN][1000 genomes]
rs10834943	0.96[ASN][1000 genomes]
rs10834945	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10834946	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834947	0.94[ASN][1000 genomes]
rs10834948	0.94[ASN][1000 genomes]
rs10834949	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834950	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834951	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10834952	0.94[ASN][1000 genomes]
rs10834961	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10834962	0.92[ASN][1000 genomes]
rs11029370	0.85[CHB][hapmap]
rs11029371	0.85[CHB][hapmap]
rs11029447	0.83[ASN][1000 genomes]
rs11029448	0.83[ASN][1000 genomes]
rs11029449	0.88[ASN][1000 genomes]
rs11029450	0.88[ASN][1000 genomes]
rs11029451	0.88[ASN][1000 genomes]
rs11029452	0.90[ASN][1000 genomes]
rs11029453	0.92[ASN][1000 genomes]
rs11029454	0.92[ASN][1000 genomes]
rs11029455	0.92[ASN][1000 genomes]
rs11029456	0.92[ASN][1000 genomes]
rs11029460	0.96[ASN][1000 genomes]
rs11029463	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11029464	0.96[ASN][1000 genomes]
rs11029465	0.96[ASN][1000 genomes]
rs11029467	0.96[ASN][1000 genomes]
rs11029468	0.96[ASN][1000 genomes]
rs11029469	0.92[ASN][1000 genomes]
rs11029470	0.96[ASN][1000 genomes]
rs11029472	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11029473	0.86[ASN][1000 genomes]
rs11029474	0.96[ASN][1000 genomes]
rs11029475	0.96[ASN][1000 genomes]
rs11029476	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11029477	0.96[ASN][1000 genomes]
rs11029478	0.96[ASN][1000 genomes]
rs11029479	0.96[ASN][1000 genomes]
rs11029483	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11029484	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs11029501	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11029508	1.00[ASN][1000 genomes]
rs11029510	1.00[ASN][1000 genomes]
rs11029514	0.92[ASN][1000 genomes]
rs11029515	0.92[ASN][1000 genomes]
rs11029516	0.92[ASN][1000 genomes]
rs11029517	0.92[ASN][1000 genomes]
rs11029518	0.92[ASN][1000 genomes]
rs11029519	1.00[CHB][hapmap];0.92[ASN][1000 genomes]
rs11029522	0.93[CEU][hapmap];1.00[CHB][hapmap];0.92[ASN][1000 genomes]
rs11029526	0.86[ASN][1000 genomes]
rs11822673	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11824243	0.96[ASN][1000 genomes]
rs11824306	0.96[ASN][1000 genomes]
rs11825099	0.88[ASN][1000 genomes]
rs12049824	0.92[ASN][1000 genomes]
rs12221994	0.92[ASN][1000 genomes]
rs12222745	0.92[ASN][1000 genomes]
rs12223352	1.00[ASN][1000 genomes]
rs12223726	0.92[ASN][1000 genomes]
rs12223851	0.88[ASN][1000 genomes]
rs12224038	0.92[ASN][1000 genomes]
rs12224075	0.92[ASN][1000 genomes]
rs12226827	0.92[ASN][1000 genomes]
rs12226840	0.92[ASN][1000 genomes]
rs12226854	0.92[ASN][1000 genomes]
rs12271557	0.81[EUR][1000 genomes]
rs12271561	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12275831	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12278192	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12284961	0.81[EUR][1000 genomes]
rs12291807	0.81[EUR][1000 genomes]
rs1461393	0.96[ASN][1000 genomes]
rs16915466	0.92[ASN][1000 genomes]
rs1841572	0.92[ASN][1000 genomes]
rs1960495	0.92[ASN][1000 genomes]
rs34019155	0.92[ASN][1000 genomes]
rs34362229	0.92[ASN][1000 genomes]
rs35215165	0.96[ASN][1000 genomes]
rs35624765	0.92[ASN][1000 genomes]
rs4420218	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55993533	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59132731	0.88[ASN][1000 genomes]
rs60193609	0.96[ASN][1000 genomes]
rs60646514	0.92[ASN][1000 genomes]
rs60811682	0.92[ASN][1000 genomes]
rs6484200	1.00[ASN][1000 genomes]
rs6484203	0.86[CEU][hapmap]
rs7105867	0.81[ASN][1000 genomes]
rs7930530	0.96[ASN][1000 genomes]
rs7938680	1.00[ASN][1000 genomes]
rs7942458	0.96[ASN][1000 genomes]
rs7945497	0.96[ASN][1000 genomes]
rs7949962	0.96[ASN][1000 genomes]
rs898735	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425701	chr11:26310425-26330495	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26318600-26319600	Enhancers	Fetal Lung	lung
2	chr11:26318800-26319400	Enhancers	Fetal Kidney	kidney
3	chr11:26319000-26319400	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr11:26319000-26319400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr11:26319000-26319400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr11:26319000-26319400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr11:26319000-26319600	Enhancers	HUES48 Cell Line	embryonic stem cell

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