Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10792241	1.00[EUR][1000 genomes]
rs11230020	0.89[MEX][hapmap]
rs11230037	0.88[MEX][hapmap]
rs11821465	0.89[MEX][hapmap]
rs12278910	0.89[MEX][hapmap]
rs12289921	0.89[MEX][hapmap]
rs1349776	0.88[AFR][1000 genomes]
rs1377558	1.00[EUR][1000 genomes]
rs1453543	1.00[GIH][hapmap];0.84[LWK][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs1453545	1.00[EUR][1000 genomes]
rs1453553	1.00[EUR][1000 genomes]
rs1530995	1.00[MEX][hapmap]
rs17153732	1.00[GIH][hapmap]
rs17153766	1.00[GIH][hapmap];0.88[MEX][hapmap];0.87[EUR][1000 genomes]
rs17153910	0.89[MEX][hapmap]
rs17153962	1.00[MEX][hapmap]
rs1938690	0.89[MEX][hapmap]
rs2198452	0.88[ASW][hapmap];1.00[GIH][hapmap];0.92[LWK][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs41340150	1.00[MEX][hapmap]
rs486952	1.00[MEX][hapmap]
rs495564	0.89[MEX][hapmap]
rs559150	1.00[MEX][hapmap]
rs567994	0.89[MEX][hapmap]
rs6591541	0.89[MEX][hapmap]
rs7120664	1.00[EUR][1000 genomes]
rs8280	0.89[MEX][hapmap]
rs9988824	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046084	chr11:59034871-59314519	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59242800-59243400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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