Variant report

Variant	rs11230020
Chromosome Location	chr11:59389113-59389114
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:59388045..59390986-chr11:59397842..59400769,2	K562	blood:
2	chr11:59381028..59383632-chr11:59387004..59389826,3	K562	blood:
3	chr11:59381899..59384726-chr11:59386703..59391439,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000110048	Chromatin interaction
ENSG00000255139	Chromatin interaction

Extended variants
information (count: 195 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:192)

rs_ID	r²[population]
rs10501380	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap]
rs1121991	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11230027	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11230037	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1151063	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs1151064	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs11821333	0.84[EUR][1000 genomes]
rs11821465	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12271188	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12272588	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12276505	0.86[JPT][hapmap];0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12278859	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12278910	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12280606	0.86[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.91[LWK][hapmap];0.83[MEX][hapmap];0.87[MKK][hapmap];0.86[YRI][hapmap];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12281969	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12285828	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12287696	1.00[TSI][hapmap]
rs12287975	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12289162	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12289921	0.94[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12290453	1.00[TSI][hapmap]
rs12292682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12797334	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1287111	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs1287441	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1287442	0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1287446	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1287448	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1287449	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1290457	0.84[EUR][1000 genomes]
rs1290459	0.84[EUR][1000 genomes]
rs1290466	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1299800	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1453543	0.81[MEX][hapmap]
rs1530995	0.91[MEX][hapmap]
rs17046	0.84[EUR][1000 genomes]
rs17153766	0.81[MEX][hapmap]
rs17153910	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17153962	0.91[MEX][hapmap]
rs17154025	1.00[CHB][hapmap]
rs17154029	0.84[EUR][1000 genomes]
rs17154134	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17154138	0.80[EUR][1000 genomes]
rs17154142	1.00[CHB][hapmap]
rs17154146	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17154149	0.80[EUR][1000 genomes]
rs17154157	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17154165	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17154169	0.80[EUR][1000 genomes]
rs17154175	0.80[EUR][1000 genomes]
rs17154180	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17154195	0.80[EUR][1000 genomes]
rs17154200	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17154203	1.00[CHB][hapmap]
rs17154205	1.00[CHB][hapmap]
rs17154222	0.80[EUR][1000 genomes]
rs17510841	1.00[TSI][hapmap]
rs17593682	1.00[TSI][hapmap]
rs17593836	1.00[TSI][hapmap]
rs17596359	1.00[TSI][hapmap]
rs1783212	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1938690	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2186597	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2198452	0.81[MEX][hapmap]
rs2508335	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2509274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs2509275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap]
rs2509276	0.80[EUR][1000 genomes]
rs2509279	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2509290	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[EUR][1000 genomes]
rs2509730	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs2927183	0.84[EUR][1000 genomes]
rs2927184	1.00[CHB][hapmap]
rs3015969	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3019740	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3110322	0.84[EUR][1000 genomes]
rs3132748	0.84[EUR][1000 genomes]
rs34350918	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3781792	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs3781793	0.80[EUR][1000 genomes]
rs3862660	0.80[EUR][1000 genomes]
rs41340150	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs41384548	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs4301803	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4393334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4515985	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs472177	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.84[EUR][1000 genomes]
rs473087	0.84[EUR][1000 genomes]
rs473490	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs473979	1.00[CHB][hapmap]
rs474844	0.84[EUR][1000 genomes]
rs475145	1.00[CHB][hapmap]
rs475706	0.84[EUR][1000 genomes]
rs478167	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs482355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs482356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs484895	0.80[EUR][1000 genomes]
rs485008	0.80[EUR][1000 genomes]
rs485803	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs486587	0.80[EUR][1000 genomes]
rs486952	0.91[MEX][hapmap]
rs488331	0.88[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];0.91[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs492652	0.84[EUR][1000 genomes]
rs4939294	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs495564	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs498099	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs498388	0.84[EUR][1000 genomes]
rs504016	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs506384	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs507235	0.80[EUR][1000 genomes]
rs508411	1.00[CHB][hapmap]
rs510122	0.80[EUR][1000 genomes]
rs510249	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs511785	0.80[EUR][1000 genomes]
rs511957	0.84[EUR][1000 genomes]
rs512194	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs512695	0.80[EUR][1000 genomes]
rs513979	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs516912	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs519605	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs519865	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs519873	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs520622	1.00[CHB][hapmap]
rs521330	0.80[EUR][1000 genomes]
rs523016	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs524102	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs528525	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs529270	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs532838	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs533166	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs536544	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs536910	0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs537595	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs537625	0.84[EUR][1000 genomes]
rs540684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs549086	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs550189	0.84[EUR][1000 genomes]
rs550822	0.82[CEU][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs552601	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs553700	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs554149	0.84[EUR][1000 genomes]
rs554848	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs555175	0.80[EUR][1000 genomes]
rs555251	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs55667192	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs559150	0.91[MEX][hapmap]
rs561604	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs563276	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs565983	0.80[EUR][1000 genomes]
rs567485	0.80[EUR][1000 genomes]
rs567603	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs567994	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs569326	0.80[EUR][1000 genomes]
rs573592	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs57529518	0.80[EUR][1000 genomes]
rs577224	1.00[CHB][hapmap]
rs57871852	0.80[EUR][1000 genomes]
rs579192	0.84[EUR][1000 genomes]
rs579362	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap]
rs579373	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs580242	0.84[EUR][1000 genomes]
rs58169611	0.80[EUR][1000 genomes]
rs58775794	0.80[EUR][1000 genomes]
rs60009036	0.80[EUR][1000 genomes]
rs60094706	0.80[EUR][1000 genomes]
rs61636608	0.80[EUR][1000 genomes]
rs6591540	0.81[EUR][1000 genomes]
rs6591541	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs693110	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7112355	1.00[TSI][hapmap]
rs7114773	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs7116567	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7118051	1.00[CEU][hapmap]
rs7119778	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs7124813	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7126593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7131059	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs73486934	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73486962	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73486971	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73486979	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73486988	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73486997	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7937245	1.00[CHB][hapmap]
rs7937684	1.00[CHB][hapmap]
rs7941643	0.84[EUR][1000 genomes]
rs7946152	0.80[EUR][1000 genomes]
rs7947036	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs7947514	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs7952024	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs7952367	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8280	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1797571	chr11:59383323-59424688	Strong transcription Flanking Active TSS Weak transcription Active TSS Genic enhancers Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
2	esv1797737	chr11:59383323-59424688	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	esv1802782	chr11:59383323-59448068	Genic enhancers Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59384400-59390000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr11:59384400-59396600	Weak transcription	Fetal Thymus	thymus
3	chr11:59384400-59396800	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr11:59384400-59397400	Weak transcription	Adipose Nuclei	Adipose
5	chr11:59384400-59402600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr11:59384400-59404400	Weak transcription	Brain Cingulate Gyrus	brain
7	chr11:59384800-59395200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:59384800-59396800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr11:59384800-59396800	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr11:59384800-59397000	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr11:59384800-59397200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr11:59384800-59397200	Weak transcription	Liver	Liver
13	chr11:59384800-59402600	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr11:59384800-59402800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr11:59384800-59404600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr11:59384800-59404800	Weak transcription	Brain Angular Gyrus	brain
17	chr11:59385000-59396600	Weak transcription	Primary T cells from cord blood	blood
18	chr11:59385000-59404400	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr11:59385000-59404800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr11:59385200-59390800	Weak transcription	HepG2	liver
21	chr11:59385400-59402800	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr11:59385400-59402800	Weak transcription	Dnd41	blood
23	chr11:59385400-59403000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr11:59385400-59404200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr11:59385600-59403000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr11:59386600-59402800	Weak transcription	Placenta	Placenta
27	chr11:59386800-59390000	Weak transcription	K562	blood
28	chr11:59387600-59391000	Weak transcription	A549	lung

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