Variant report

Variant rs3781792
Chromosome Location chr11:59554951-59554952
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59524400-59557000 Weak transcription Rectal Smooth Muscle rectum
2 chr11:59524600-59557400 Weak transcription Colon Smooth Muscle Colon
3 chr11:59524600-59573800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:59524800-59555400 Weak transcription Stomach Smooth Muscle stomach
5 chr11:59525600-59557800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr11:59534400-59559600 Weak transcription Fetal Brain Female brain
7 chr11:59534600-59571600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr11:59537600-59570400 Weak transcription Fetal Kidney kidney
9 chr11:59540800-59556200 Weak transcription Primary B cells from peripheral blood blood
10 chr11:59540800-59559600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr11:59541000-59560000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr11:59541000-59573600 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr11:59541800-59559200 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr11:59542200-59571400 Weak transcription Thymus Thymus
15 chr11:59542800-59557800 Weak transcription Fetal Stomach stomach
16 chr11:59543200-59557000 Weak transcription Primary T cells fromperipheralblood blood
17 chr11:59543200-59559200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr11:59544400-59573200 Weak transcription Psoas Muscle Psoas
19 chr11:59546000-59556600 Weak transcription Brain Angular Gyrus brain
20 chr11:59546000-59557800 Weak transcription Brain Anterior Caudate brain
21 chr11:59546000-59560800 Weak transcription Brain Cingulate Gyrus brain
22 chr11:59546400-59568800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr11:59548200-59555400 Weak transcription Primary B cells from cord blood blood
24 chr11:59548400-59556200 Weak transcription Primary hematopoietic stem cells blood
25 chr11:59551400-59572800 Weak transcription Dnd41 blood
26 chr11:59551600-59573600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr11:59551600-59576600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr11:59551600-59577200 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr11:59552000-59573000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr11:59552400-59555000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr11:59552800-59555600 Genic enhancers Fetal Intestine Small intestine
32 chr11:59553000-59555200 Enhancers Sigmoid Colon Sigmoid Colon
33 chr11:59553200-59555600 Enhancers Stomach Mucosa stomach
34 chr11:59553200-59556000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:59553400-59555000 Enhancers Hela-S3 cervix
36 chr11:59553400-59555200 Enhancers HepG2 liver
37 chr11:59553400-59555400 Enhancers HMEC breast
38 chr11:59553600-59555000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr11:59553800-59555000 Enhancers Colonic Mucosa Colon
40 chr11:59553800-59555800 Enhancers NHDF-Ad bronchial
41 chr11:59553800-59556400 Genic enhancers Breast Myoepithelial Primary Cells Breast
42 chr11:59554000-59555000 Genic enhancers Primary neutrophils fromperipheralblood blood
43 chr11:59554000-59555000 Flanking Active TSS A549 lung
44 chr11:59554000-59555400 Flanking Active TSS Muscle Satellite Cultured Cells --
45 chr11:59554000-59555600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr11:59554000-59555800 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr11:59554000-59555800 Enhancers HSMM muscle
48 chr11:59554000-59556000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr11:59554000-59556000 Enhancers Fetal Heart heart
50 chr11:59554200-59555000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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