Variant report

Variant rs478167
Chromosome Location chr11:59542101-59542102
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59524200-59545200 Weak transcription Brain Hippocampus Middle brain
2 chr11:59524400-59542200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr11:59524400-59545600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr11:59524400-59557000 Weak transcription Rectal Smooth Muscle rectum
5 chr11:59524600-59557400 Weak transcription Colon Smooth Muscle Colon
6 chr11:59524600-59573800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:59524800-59543000 Weak transcription A549 lung
8 chr11:59524800-59543800 Weak transcription NH-A brain
9 chr11:59524800-59553400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr11:59524800-59555400 Weak transcription Stomach Smooth Muscle stomach
11 chr11:59525200-59543600 Weak transcription Hela-S3 cervix
12 chr11:59525400-59543400 Weak transcription HMEC breast
13 chr11:59525400-59551200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr11:59525600-59557800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr11:59530800-59545000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr11:59532000-59543800 Weak transcription Muscle Satellite Cultured Cells --
17 chr11:59533000-59544000 Weak transcription Psoas Muscle Psoas
18 chr11:59533000-59545000 Weak transcription Brain Substantia Nigra brain
19 chr11:59534400-59559600 Weak transcription Fetal Brain Female brain
20 chr11:59534600-59544600 Weak transcription Aorta Aorta
21 chr11:59534600-59554200 Weak transcription HSMMtube muscle
22 chr11:59534600-59571600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr11:59534800-59542200 Weak transcription Ovary ovary
24 chr11:59534800-59542600 Weak transcription Osteobl bone
25 chr11:59535200-59544800 Weak transcription Colonic Mucosa Colon
26 chr11:59535400-59543600 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr11:59535800-59545800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr11:59537600-59543800 Weak transcription NHLF lung
29 chr11:59537600-59570400 Weak transcription Fetal Kidney kidney
30 chr11:59537800-59553200 Weak transcription NHDF-Ad bronchial
31 chr11:59538000-59545400 Genic enhancers Fetal Intestine Large intestine
32 chr11:59538200-59543600 Weak transcription HepG2 liver
33 chr11:59539000-59545200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr11:59539200-59545600 Weak transcription Brain Anterior Caudate brain
35 chr11:59539400-59546600 Weak transcription Esophagus oesophagus
36 chr11:59539600-59542600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr11:59539600-59543600 Weak transcription Liver Liver
38 chr11:59539600-59544000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr11:59539600-59545000 Weak transcription Brain Angular Gyrus brain
40 chr11:59539600-59554200 Weak transcription Right Ventricle heart
41 chr11:59539800-59542200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr11:59539800-59542200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr11:59539800-59543000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr11:59539800-59544200 Weak transcription Gastric stomach
45 chr11:59539800-59553000 Weak transcription Spleen Spleen
46 chr11:59539800-59554400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr11:59540000-59542400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr11:59540200-59544200 Weak transcription Right Atrium heart
49 chr11:59540200-59544400 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr11:59540400-59542200 Weak transcription Adipose Nuclei Adipose

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