The 2.0 version of rSNPBase

Variant report

Variant rs1287446
Chromosome Location chr11:59330583-59330584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59328600-59333200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:59328600-59333200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:59328600-59333200 Weak transcription Esophagus oesophagus
4 chr11:59328800-59333000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr11:59328800-59333200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr11:59328800-59333200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr11:59328800-59333400 Weak transcription Spleen Spleen
8 chr11:59329000-59330800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr11:59329000-59332200 Weak transcription Fetal Muscle Leg muscle
10 chr11:59329000-59332400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr11:59329000-59332400 Weak transcription GM12878-XiMat blood
12 chr11:59329000-59332800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr11:59329000-59332800 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr11:59329000-59333000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr11:59329000-59333000 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr11:59329000-59333000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr11:59329000-59333000 Weak transcription Primary monocytes fromperipheralblood blood
18 chr11:59329000-59333000 Weak transcription Primary B cells from cord blood blood
19 chr11:59329000-59333000 Weak transcription Primary hematopoietic stem cells blood
20 chr11:59329000-59333000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr11:59329000-59333000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr11:59329000-59333000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr11:59329000-59333000 Weak transcription Brain Anterior Caudate brain
24 chr11:59329000-59333000 Weak transcription Brain Cingulate Gyrus brain
25 chr11:59329000-59333000 Weak transcription Brain Hippocampus Middle brain
26 chr11:59329000-59333000 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr11:59329000-59333000 Weak transcription Fetal Thymus thymus
28 chr11:59329000-59333000 Weak transcription Right Atrium heart
29 chr11:59329000-59333000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr11:59329000-59333000 Weak transcription HSMMtube muscle
31 chr11:59329000-59333000 Weak transcription HUVEC blood vessel
32 chr11:59329000-59333000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr11:59329000-59333000 Weak transcription NH-A brain
34 chr11:59329000-59333000 Weak transcription NHLF lung
35 chr11:59329000-59333200 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr11:59329000-59333200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr11:59329000-59333200 Weak transcription Gastric stomach
38 chr11:59329000-59333200 Weak transcription Pancreas Pancrea
39 chr11:59329000-59333200 Weak transcription Stomach Smooth Muscle stomach
40 chr11:59329000-59333400 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr11:59329200-59332800 Weak transcription Fetal Muscle Trunk muscle
42 chr11:59329200-59333000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr11:59329200-59333000 Weak transcription Colonic Mucosa Colon
44 chr11:59329200-59333200 Weak transcription Primary T cells fromperipheralblood blood
45 chr11:59329200-59333200 Weak transcription Fetal Brain Male brain
46 chr11:59329400-59333000 Weak transcription Primary B cells from peripheral blood blood
47 chr11:59329400-59333000 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr11:59329400-59333200 Weak transcription Primary T cells from cord blood blood
49 chr11:59329400-59333200 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr11:59329400-59333200 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015