Variant report

Variant	rs6591541
Chromosome Location	chr11:59324664-59324665
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr11:59324420-59325168	HepG2	liver:	n/a	n/a
2	IRF1	chr11:59323697-59325465	K562	blood:	n/a	chr11:59323975-59323996 chr11:59324101-59324111 chr11:59323981-59323995
3	E2F6	chr11:59323465-59325142	A549	lung:	n/a	n/a
4	ARID3A	chr11:59323778-59325256	HepG2	liver:	n/a	chr11:59324316-59324332 chr11:59324315-59324331
5	CHD2	chr11:59323726-59325142	K562	blood:	n/a	n/a
6	GTF3C2	chr11:59323507-59325908	K562	blood:	n/a	n/a
7	CUX1	chr11:59323289-59325115	K562	blood:	n/a	chr11:59323507-59323518
8	RUNX3	chr11:59323240-59325269	GM12878	blood:	n/a	n/a
9	TBL1XR1	chr11:59323332-59325162	K562	blood:	n/a	n/a
10	CBX3	chr11:59323319-59325328	HCT-116	colon:	n/a	n/a
11	CREB1	chr11:59323421-59325348	GM12878	blood:	n/a	n/a
12	UBTF	chr11:59324320-59325117	K562	blood:	n/a	n/a
13	RPC155	chr11:59323681-59325254	K562	blood:	n/a	n/a
14	SP1	chr11:59324449-59325265	A549	lung:	n/a	n/a
15	BCL3	chr11:59324622-59325145	A549	lung:	n/a	n/a
16	SIN3AK20	chr11:59324499-59325160	A549	lung:	n/a	n/a
17	MXI1	chr11:59324475-59324692	GM12878	blood:	n/a	n/a
18	MYC	chr11:59323498-59325518	A549	lung:	n/a	chr11:59323848-59323859 chr11:59323849-59323859 chr11:59323849-59323858 chr11:59323848-59323858 chr11:59323848-59323859 chr11:59323848-59323858 chr11:59323849-59323859 chr11:59323847-59323860 chr11:59323848-59323859 chr11:59323847-59323860
19	MYC	chr11:59323527-59325495	K562	blood:	n/a	chr11:59323848-59323859 chr11:59323849-59323859 chr11:59323849-59323858 chr11:59323848-59323858 chr11:59323848-59323859 chr11:59323848-59323858 chr11:59323849-59323859 chr11:59323847-59323860 chr11:59323848-59323859 chr11:59323847-59323860
20	FOXM1	chr11:59324598-59325410	GM12878	blood:	n/a	n/a
21	PAX5	chr11:59324659-59325189	GM12878	blood:	n/a	n/a
22	MYC	chr11:59323673-59325104	K562	blood:	n/a	chr11:59323848-59323859 chr11:59323849-59323859 chr11:59323849-59323858 chr11:59323848-59323858 chr11:59323848-59323859 chr11:59323848-59323858 chr11:59323849-59323859 chr11:59323847-59323860 chr11:59323848-59323859 chr11:59323847-59323860
23	RCOR1	chr11:59324430-59325095	K562	blood:	n/a	n/a
24	TCF7L2	chr11:59324464-59325262	PANC-1	pancreas:	n/a	chr11:59324941-59324950 chr11:59324942-59324949 chr11:59324937-59324953
25	MXI1	chr11:59324466-59325089	K562	blood:	n/a	n/a
26	CEBPB	chr11:59324461-59325593	K562	blood:	n/a	n/a
27	KAP1	chr11:59322970-59325229	HEK293	kidney:	n/a	n/a
28	UBTF	chr11:59323627-59325300	K562	blood:	n/a	n/a
29	IKZF1	chr11:59323615-59324952	GM12878	blood:	n/a	n/a
30	STAT3	chr11:59323718-59325152	GM12878	blood:	n/a	chr11:59324007-59324019
31	TEAD4	chr11:59324664-59325290	ECC-1	luminal epithelium:	n/a	n/a
32	TBP	chr11:59323561-59325498	GM12878	blood:	n/a	n/a
33	MAX	chr11:59324311-59324673	K562	blood:	n/a	n/a
34	ETS1	chr11:59324429-59325314	A549	lung:	n/a	n/a
35	MYC	chr11:59323312-59325815	K562	blood:	n/a	chr11:59323848-59323859 chr11:59323849-59323859 chr11:59323849-59323858 chr11:59323848-59323858 chr11:59323848-59323859 chr11:59325680-59325689 chr11:59323848-59323858 chr11:59323849-59323859 chr11:59323847-59323860 chr11:59323848-59323859 chr11:59323847-59323860
36	TEAD4	chr11:59324619-59325255	HepG2	liver:	n/a	n/a
37	RXRA	chr11:59324605-59325385	SK-N-SH	brain:	n/a	n/a
38	ZMIZ1	chr11:59324362-59325147	K562	blood:	n/a	n/a
39	TBP	chr11:59324413-59325435	K562	blood:	n/a	n/a
40	POLR2A	chr11:59324170-59324980	MCF10A-Er-Src	breast:	n/a	n/a
41	PML	chr11:59324344-59325237	K562	blood:	n/a	n/a
42	RPC155	chr11:59324644-59325296	Hela-S3	cervix:	n/a	n/a
43	CHD1	chr11:59323524-59325061	GM12878	blood:	n/a	n/a
44	EP300	chr11:59323620-59325247	K562	blood:	n/a	chr11:59323731-59323745 chr11:59324525-59324541 chr11:59325081-59325095
45	MAX	chr11:59323570-59325196	ECC-1	luminal epithelium:	n/a	chr11:59323848-59323859 chr11:59323849-59323859 chr11:59323849-59323858 chr11:59323848-59323858 chr11:59323848-59323859 chr11:59323848-59323858 chr11:59323849-59323859 chr11:59323847-59323860 chr11:59323848-59323859 chr11:59323847-59323860
46	MYC	chr11:59323526-59325231	K562	blood:	n/a	chr11:59323848-59323859 chr11:59323849-59323859 chr11:59323849-59323858 chr11:59323848-59323858 chr11:59323848-59323859 chr11:59323848-59323858 chr11:59323849-59323859 chr11:59323847-59323860 chr11:59323848-59323859 chr11:59323847-59323860
47	MYBL2	chr11:59323560-59325397	HepG2	liver:	n/a	n/a
48	STAT5A	chr11:59324599-59325170	GM12878	blood:	n/a	n/a
49	MAX	chr11:59324398-59325149	GM12878	blood:	n/a	n/a
50	POLR2A	chr11:59324619-59325154	U87	brain:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:59321356..59325949-chr11:59373523..59377145,4	K562	blood:
2	chr11:59323867..59325962-chr11:59436503..59438202,2	K562	blood:
3	chr11:59324538..59326283-chr11:59383295..59385264,2	K562	blood:
4	chr11:59316717..59319546-chr11:59322343..59325398,3	MCF-7	breast:
5	chr11:59322976..59324823-chr11:59375645..59377849,2	K562	blood:
6	chr11:59322974..59324726-chr11:59383505..59386362,2	K562	blood:

Variant related genes	Relation type
RNU7-58P	TF binding region
ENSG00000255355	Chromatin interaction
ENSG00000110048	Chromatin interaction
ENSG00000255139	Chromatin interaction

Extended variants
information (count: 158 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:158)

rs_ID	r²[population]
rs1121991	0.88[EUR][1000 genomes]
rs11230020	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11230027	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11230037	0.89[ASW][hapmap];1.00[CEU][hapmap];0.83[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.92[EUR][1000 genomes]
rs1151063	0.80[EUR][1000 genomes]
rs1151064	0.80[EUR][1000 genomes]
rs11821333	0.84[EUR][1000 genomes]
rs11821465	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.92[EUR][1000 genomes]
rs12271188	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12272588	0.88[EUR][1000 genomes]
rs12276505	1.00[CHB][hapmap];0.86[JPT][hapmap];0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12278859	0.92[EUR][1000 genomes]
rs12278910	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12280606	1.00[ASW][hapmap];0.86[CEU][hapmap];0.83[CHD][hapmap];0.88[JPT][hapmap];0.96[LWK][hapmap];0.83[MEX][hapmap];0.99[MKK][hapmap];0.96[YRI][hapmap];0.92[EUR][1000 genomes]
rs12281969	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12285828	0.86[EUR][1000 genomes]
rs12287696	1.00[TSI][hapmap]
rs12287975	0.88[EUR][1000 genomes]
rs12289162	0.92[EUR][1000 genomes]
rs12289921	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12292682	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes]
rs12797334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1287111	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs1287441	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1287442	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1287446	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1287448	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1287449	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1290457	0.84[EUR][1000 genomes]
rs1290459	0.84[EUR][1000 genomes]
rs1290466	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1299800	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1453543	0.81[MEX][hapmap]
rs1530995	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs17046	0.84[EUR][1000 genomes]
rs17153766	0.81[MEX][hapmap]
rs17153910	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17153962	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs17153982	1.00[CHB][hapmap]
rs17154029	0.84[EUR][1000 genomes]
rs17154134	0.80[EUR][1000 genomes]
rs17154138	0.80[EUR][1000 genomes]
rs17154146	0.80[EUR][1000 genomes]
rs17593682	1.00[TSI][hapmap]
rs17593836	1.00[TSI][hapmap]
rs1783212	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1938690	0.89[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes]
rs2186597	0.88[EUR][1000 genomes]
rs2198452	0.81[MEX][hapmap]
rs2298868	1.00[CHB][hapmap]
rs2298869	1.00[CHB][hapmap]
rs2508335	1.00[JPT][hapmap]
rs2509274	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs2509275	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap]
rs2509276	0.80[EUR][1000 genomes]
rs2509279	1.00[JPT][hapmap]
rs2509290	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[EUR][1000 genomes]
rs2927183	0.84[EUR][1000 genomes]
rs3015969	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3019740	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3110322	0.84[EUR][1000 genomes]
rs3132748	0.84[EUR][1000 genomes]
rs34350918	0.92[EUR][1000 genomes]
rs3781793	0.80[EUR][1000 genomes]
rs41340150	0.91[MEX][hapmap]
rs41384548	0.80[EUR][1000 genomes]
rs4301803	0.88[EUR][1000 genomes]
rs4393334	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes]
rs4515985	0.88[EUR][1000 genomes]
rs472177	1.00[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[EUR][1000 genomes]
rs473087	0.84[EUR][1000 genomes]
rs473490	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs474844	0.84[EUR][1000 genomes]
rs475706	0.84[EUR][1000 genomes]
rs478167	0.80[EUR][1000 genomes]
rs482355	0.80[EUR][1000 genomes]
rs485008	0.80[EUR][1000 genomes]
rs485803	1.00[JPT][hapmap]
rs486587	0.80[EUR][1000 genomes]
rs486952	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs488331	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.91[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs492652	0.84[EUR][1000 genomes]
rs4939294	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs495564	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs498099	0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs498388	0.84[EUR][1000 genomes]
rs504016	0.80[EUR][1000 genomes]
rs507235	0.80[EUR][1000 genomes]
rs510122	0.80[EUR][1000 genomes]
rs510249	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs511785	0.80[EUR][1000 genomes]
rs511957	0.84[EUR][1000 genomes]
rs512194	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs512695	0.80[EUR][1000 genomes]
rs513979	1.00[JPT][hapmap]
rs516912	0.80[EUR][1000 genomes]
rs518026	1.00[CHB][hapmap]
rs519605	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs519865	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs519873	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs521330	0.80[EUR][1000 genomes]
rs523016	0.80[EUR][1000 genomes]
rs524102	1.00[JPT][hapmap]
rs529270	0.80[EUR][1000 genomes]
rs532838	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs533166	0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs536544	0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs536910	1.00[CHB][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs537595	0.91[MEX][hapmap]
rs537625	0.84[EUR][1000 genomes]
rs540684	0.89[ASW][hapmap];1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs549086	0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs550189	0.84[EUR][1000 genomes]
rs550822	0.82[CEU][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs552601	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.84[EUR][1000 genomes]
rs553700	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs554149	0.84[EUR][1000 genomes]
rs554848	0.80[EUR][1000 genomes]
rs555175	0.80[EUR][1000 genomes]
rs555251	0.91[MEX][hapmap]
rs55667192	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs559150	1.00[CHB][hapmap];0.91[MEX][hapmap]
rs561604	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs563276	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs565482	1.00[CHB][hapmap]
rs565983	0.80[EUR][1000 genomes]
rs567485	0.80[EUR][1000 genomes]
rs567994	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.90[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs569326	0.80[EUR][1000 genomes]
rs573592	0.80[EUR][1000 genomes]
rs57529518	0.80[EUR][1000 genomes]
rs57871852	0.80[EUR][1000 genomes]
rs579192	0.84[EUR][1000 genomes]
rs579362	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs579373	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs580242	0.84[EUR][1000 genomes]
rs58775794	0.80[EUR][1000 genomes]
rs60009036	0.80[EUR][1000 genomes]
rs60094706	0.80[EUR][1000 genomes]
rs61636608	0.80[EUR][1000 genomes]
rs6591540	0.85[EUR][1000 genomes]
rs693110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7112355	1.00[TSI][hapmap]
rs7116567	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7118051	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs7119778	0.80[EUR][1000 genomes]
rs7124813	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7126593	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[EUR][1000 genomes]
rs73486934	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73486962	0.92[EUR][1000 genomes]
rs73486971	0.92[EUR][1000 genomes]
rs73486979	0.92[EUR][1000 genomes]
rs73486988	0.88[EUR][1000 genomes]
rs73486997	0.88[EUR][1000 genomes]
rs7941643	0.84[EUR][1000 genomes]
rs7947514	0.80[EUR][1000 genomes]
rs7952367	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8280	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59319000-59327800	Weak transcription	Stomach Mucosa	stomach
2	chr11:59322800-59325800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:59322800-59326000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
4	chr11:59322800-59326200	Active TSS	H9 Cell Line	embryonic stem cell
5	chr11:59322800-59329000	Active TSS	ES-I3 Cell Line	embryonic stem cell
6	chr11:59323000-59324800	Active TSS	Fetal Brain Female	brain
7	chr11:59323000-59324800	Active TSS	Stomach Smooth Muscle	stomach
8	chr11:59323000-59325000	Enhancers	Liver	Liver
9	chr11:59323000-59325000	Active TSS	Brain Angular Gyrus	brain
10	chr11:59323000-59325000	Active TSS	Brain Substantia Nigra	brain
11	chr11:59323000-59325000	Active TSS	Fetal Brain Male	brain
12	chr11:59323000-59325000	Active TSS	HSMMtube	muscle
13	chr11:59323000-59325200	Active TSS	Brain Inferior Temporal Lobe	brain
14	chr11:59323000-59325600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:59323000-59325600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr11:59323000-59325600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr11:59323000-59325600	Active TSS	iPS-18 Cell Line	embryonic stem cell
18	chr11:59323000-59325600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr11:59323000-59325600	Bivalent/Poised TSS	Brain Germinal Matrix	brain
20	chr11:59323000-59325600	Bivalent/Poised TSS	Fetal Kidney	kidney
21	chr11:59323000-59325600	Active TSS	A549	lung
22	chr11:59323000-59325600	Active TSS	GM12878-XiMat	blood
23	chr11:59323000-59325800	Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr11:59323000-59325800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr11:59323000-59326000	Active TSS	HUES6 Cell Line	embryonic stem cell
26	chr11:59323000-59326000	Active TSS	NH-A	brain
27	chr11:59323000-59326200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
28	chr11:59323000-59326200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr11:59323200-59324800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr11:59323200-59324800	Active TSS	Duodenum Smooth Muscle	Duodenum
31	chr11:59323200-59324800	Active TSS	Fetal Lung	lung
32	chr11:59323200-59325000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
33	chr11:59323200-59325000	Enhancers	Spleen	Spleen
34	chr11:59323200-59325000	Flanking Active TSS	Hela-S3	cervix
35	chr11:59323200-59325200	Active TSS	Rectal Smooth Muscle	rectum
36	chr11:59323200-59325200	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
37	chr11:59323200-59325400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr11:59323200-59325600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr11:59323200-59325600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr11:59323200-59325600	Active TSS	Fetal Intestine Large	intestine
41	chr11:59323200-59325800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr11:59323200-59325800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
43	chr11:59323200-59325800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr11:59323200-59326000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr11:59323200-59326000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr11:59323200-59326200	Active TSS	H1 Cell Line	embryonic stem cell
47	chr11:59323400-59325000	Flanking Active TSS	Primary B cells from peripheral blood	blood
48	chr11:59323400-59325000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
49	chr11:59323400-59325200	Active TSS	Fetal Muscle Trunk	muscle
50	chr11:59323400-59325400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin

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