Variant report

Variant	rs1151064
Chromosome Location	chr11:59526704-59526705
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:59525592..59530085-chr11:59541874..59544413,4	MCF-7	breast:
2	chr11:59524086..59527100-chr11:59562036..59566257,3	K562	blood:

Extended variants
information (count: 240 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:237)

rs_ID	r²[population]
rs10501380	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.85[EUR][1000 genomes]
rs1121991	0.92[EUR][1000 genomes]
rs11230020	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs11230027	0.80[EUR][1000 genomes]
rs11230037	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs1151063	0.80[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11821333	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11821465	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs12272588	0.92[EUR][1000 genomes]
rs12276505	0.86[JPT][hapmap]
rs12278859	0.88[EUR][1000 genomes]
rs12278910	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs12280606	0.86[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.88[JPT][hapmap];0.88[EUR][1000 genomes]
rs12285828	0.90[EUR][1000 genomes]
rs12287696	1.00[TSI][hapmap]
rs12287975	0.84[EUR][1000 genomes]
rs12289162	0.88[EUR][1000 genomes]
rs12289921	1.00[CEU][hapmap];0.91[CHD][hapmap];0.86[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap]
rs12290453	1.00[TSI][hapmap]
rs12292682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes]
rs12797334	0.80[EUR][1000 genomes]
rs1287111	0.80[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1287441	0.80[EUR][1000 genomes]
rs1287446	0.80[EUR][1000 genomes]
rs1287448	0.80[EUR][1000 genomes]
rs1290457	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1290459	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1290460	0.80[AMR][1000 genomes]
rs1299800	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs17046	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17153910	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs17153962	1.00[MEX][hapmap]
rs17154025	1.00[CHB][hapmap];0.80[AMR][1000 genomes]
rs17154029	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17154134	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs17154138	1.00[EUR][1000 genomes]
rs17154142	1.00[CHB][hapmap]
rs17154146	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs17154149	1.00[EUR][1000 genomes]
rs17154157	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs17154165	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs17154169	1.00[EUR][1000 genomes]
rs17154175	1.00[EUR][1000 genomes]
rs17154180	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs17154195	1.00[EUR][1000 genomes]
rs17154200	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs17154203	1.00[CHB][hapmap]
rs17154205	1.00[CHB][hapmap]
rs17154216	1.00[CHB][hapmap]
rs17154222	1.00[EUR][1000 genomes]
rs17154227	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes]
rs17154234	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs17510841	1.00[TSI][hapmap]
rs17593682	1.00[TSI][hapmap]
rs17593836	1.00[TSI][hapmap]
rs17596359	1.00[TSI][hapmap]
rs17596862	1.00[CHB][hapmap];1.00[TSI][hapmap]
rs17597065	1.00[CHB][hapmap];1.00[TSI][hapmap]
rs17597092	1.00[TSI][hapmap]
rs1783212	0.80[EUR][1000 genomes]
rs1938690	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs2186597	0.92[EUR][1000 genomes]
rs2447309	0.80[AMR][1000 genomes]
rs2447310	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2508335	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2508339	0.80[AMR][1000 genomes]
rs2509274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2509275	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2509276	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2509279	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2509290	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2509730	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs2927182	0.85[EUR][1000 genomes]
rs2927183	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2927184	1.00[CHB][hapmap];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2957223	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2957227	0.80[AMR][1000 genomes]
rs3015969	0.80[EUR][1000 genomes]
rs3110322	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3132748	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34350918	0.88[EUR][1000 genomes]
rs35211634	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs3781792	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs3781793	1.00[EUR][1000 genomes]
rs3862660	1.00[EUR][1000 genomes]
rs41340150	1.00[CHB][hapmap];1.00[MEX][hapmap]
rs41384548	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4301803	0.92[EUR][1000 genomes]
rs4356243	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes]
rs4393334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes]
rs4515985	0.92[EUR][1000 genomes]
rs471369	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs472152	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs472177	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs473087	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs473490	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs473679	0.80[AMR][1000 genomes]
rs473979	1.00[CHB][hapmap];0.80[AMR][1000 genomes]
rs474844	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs475145	1.00[CHB][hapmap];0.80[AMR][1000 genomes]
rs475706	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs475800	0.81[ASN][1000 genomes]
rs477577	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs477729	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs478167	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs478924	0.80[AMR][1000 genomes]
rs479264	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs480944	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs481893	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs482355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs482356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs484030	0.81[EUR][1000 genomes]
rs484814	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs484895	1.00[EUR][1000 genomes]
rs485008	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs485803	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs486587	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs486952	1.00[MEX][hapmap]
rs487312	0.80[AMR][1000 genomes]
rs488331	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs492652	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs493025	0.80[AMR][1000 genomes]
rs4939294	0.80[EUR][1000 genomes]
rs494110	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs495564	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]
rs496938	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs497596	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs498099	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs498165	0.80[AMR][1000 genomes]
rs498299	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs498388	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs499054	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs501288	0.80[AMR][1000 genomes]
rs504016	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs504320	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs506384	1.00[CHB][hapmap];1.00[MEX][hapmap];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs507235	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs508411	1.00[CHB][hapmap];0.80[AMR][1000 genomes]
rs510122	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs511263	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs511785	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs511957	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs512194	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs512690	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs512695	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs513979	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs516912	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs519605	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs519865	0.80[EUR][1000 genomes]
rs519873	0.80[EUR][1000 genomes]
rs520622	1.00[CHB][hapmap];0.85[AMR][1000 genomes]
rs521330	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs523016	0.80[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs524102	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs526672	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs528525	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs529270	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs532293	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs532838	0.80[EUR][1000 genomes]
rs533166	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs536544	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs536910	0.80[EUR][1000 genomes]
rs537595	1.00[CHB][hapmap];1.00[MEX][hapmap];0.80[AMR][1000 genomes]
rs537625	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs538169	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs540684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs540989	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs549086	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs550189	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs550449	0.80[AMR][1000 genomes]
rs550822	0.82[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs552601	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs553700	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs554149	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs554460	0.80[AMR][1000 genomes]
rs554848	0.80[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs555175	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs555251	1.00[CHB][hapmap];1.00[MEX][hapmap];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs55667192	0.80[EUR][1000 genomes]
rs558569	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs559150	1.00[MEX][hapmap]
rs561029	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs561604	0.80[EUR][1000 genomes]
rs562657	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs563267	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs563276	0.80[EUR][1000 genomes]
rs563800	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs565026	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs565983	1.00[EUR][1000 genomes]
rs567253	0.80[AMR][1000 genomes]
rs567485	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs567603	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs567994	1.00[CEU][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap]
rs569326	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs571451	0.80[AMR][1000 genomes]
rs573592	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs57529518	1.00[EUR][1000 genomes]
rs577224	1.00[CHB][hapmap];0.80[AMR][1000 genomes]
rs577644	0.81[ASN][1000 genomes]
rs57871852	1.00[EUR][1000 genomes]
rs579192	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs579362	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs579373	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs580242	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs581265	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58169611	1.00[EUR][1000 genomes]
rs58775794	1.00[EUR][1000 genomes]
rs60009036	1.00[EUR][1000 genomes]
rs60094706	1.00[EUR][1000 genomes]
rs61636608	1.00[EUR][1000 genomes]
rs6591541	0.80[EUR][1000 genomes]
rs693110	1.00[CEU][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs7108731	0.81[EUR][1000 genomes]
rs7112355	1.00[TSI][hapmap]
rs7114773	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs7116567	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs7117509	1.00[CEU][hapmap];1.00[TSI][hapmap];0.85[EUR][1000 genomes]
rs7119778	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs7123969	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.98[EUR][1000 genomes]
rs7124813	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs7126593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes]
rs7131059	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs73486962	0.88[EUR][1000 genomes]
rs73486971	0.88[EUR][1000 genomes]
rs73486979	0.88[EUR][1000 genomes]
rs73486988	0.92[EUR][1000 genomes]
rs73486997	0.92[EUR][1000 genomes]
rs7933970	0.98[EUR][1000 genomes]
rs7937245	1.00[CHB][hapmap]
rs7937684	1.00[CHB][hapmap]
rs7941643	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7946152	1.00[EUR][1000 genomes]
rs7947036	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs7947514	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7952024	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7952367	0.80[EUR][1000 genomes]
rs8280	1.00[CEU][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752406	chr11:59490424-59529524	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	n/a
2	esv2755215	chr11:59515524-59529524	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	n/a
3	nsv1046086	chr11:59520424-59561455	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59523800-59532000	Weak transcription	Esophagus	oesophagus
2	chr11:59523800-59533600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr11:59524000-59539200	Weak transcription	Liver	Liver
4	chr11:59524200-59533800	Weak transcription	Fetal Heart	heart
5	chr11:59524200-59545200	Weak transcription	Brain Hippocampus Middle	brain
6	chr11:59524400-59534000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr11:59524400-59534200	Weak transcription	Aorta	Aorta
8	chr11:59524400-59542200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr11:59524400-59545600	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr11:59524400-59557000	Weak transcription	Rectal Smooth Muscle	rectum
11	chr11:59524600-59527000	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr11:59524600-59528600	Enhancers	Pancreas	Pancrea
13	chr11:59524600-59528800	Weak transcription	Right Ventricle	heart
14	chr11:59524600-59529000	Weak transcription	Psoas Muscle	Psoas
15	chr11:59524600-59533800	Weak transcription	Primary T cells from cord blood	blood
16	chr11:59524600-59534000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr11:59524600-59537200	Weak transcription	NHLF	lung
18	chr11:59524600-59538400	Weak transcription	Brain Anterior Caudate	brain
19	chr11:59524600-59557400	Weak transcription	Colon Smooth Muscle	Colon
20	chr11:59524600-59573800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr11:59524800-59528400	Weak transcription	HUES6 Cell Line	embryonic stem cell
22	chr11:59524800-59529000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr11:59524800-59532800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr11:59524800-59533400	Weak transcription	Primary B cells from peripheral blood	blood
25	chr11:59524800-59534000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr11:59524800-59534200	Weak transcription	Spleen	Spleen
27	chr11:59524800-59536400	Weak transcription	NHDF-Ad	bronchial
28	chr11:59524800-59539400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr11:59524800-59540600	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr11:59524800-59543000	Weak transcription	A549	lung
31	chr11:59524800-59543800	Weak transcription	NH-A	brain
32	chr11:59524800-59553400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr11:59524800-59555400	Weak transcription	Stomach Smooth Muscle	stomach
34	chr11:59525000-59527000	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr11:59525000-59529400	Weak transcription	Adipose Nuclei	Adipose
36	chr11:59525000-59529600	Weak transcription	Colonic Mucosa	Colon
37	chr11:59525000-59529800	Weak transcription	HUES64 Cell Line	embryonic stem cell
38	chr11:59525000-59529800	Weak transcription	Placenta	Placenta
39	chr11:59525000-59530400	Genic enhancers	Fetal Intestine Large	intestine
40	chr11:59525000-59531600	Weak transcription	Muscle Satellite Cultured Cells	--
41	chr11:59525000-59533400	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr11:59525000-59539000	Weak transcription	HUVEC	blood vessel
43	chr11:59525200-59526800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
44	chr11:59525200-59527000	Genic enhancers	Fetal Intestine Small	intestine
45	chr11:59525200-59528200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr11:59525200-59529000	Weak transcription	Ovary	ovary
47	chr11:59525200-59530000	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr11:59525200-59530200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr11:59525200-59532600	Weak transcription	Small Intestine	intestine
50	chr11:59525200-59533600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Variant report

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