Variant report

Variant rs17154169
Chromosome Location chr11:59554272-59554273
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59524400-59557000 Weak transcription Rectal Smooth Muscle rectum
2 chr11:59524600-59557400 Weak transcription Colon Smooth Muscle Colon
3 chr11:59524600-59573800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:59524800-59555400 Weak transcription Stomach Smooth Muscle stomach
5 chr11:59525600-59557800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr11:59534400-59559600 Weak transcription Fetal Brain Female brain
7 chr11:59534600-59571600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr11:59537600-59570400 Weak transcription Fetal Kidney kidney
9 chr11:59539800-59554400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr11:59540800-59556200 Weak transcription Primary B cells from peripheral blood blood
11 chr11:59540800-59559600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr11:59541000-59560000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr11:59541000-59573600 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr11:59541800-59559200 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr11:59542200-59571400 Weak transcription Thymus Thymus
16 chr11:59542800-59557800 Weak transcription Fetal Stomach stomach
17 chr11:59543200-59554600 Weak transcription H9 Cell Line embryonic stem cell
18 chr11:59543200-59557000 Weak transcription Primary T cells fromperipheralblood blood
19 chr11:59543200-59559200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr11:59544400-59573200 Weak transcription Psoas Muscle Psoas
21 chr11:59545800-59554400 Weak transcription Brain Substantia Nigra brain
22 chr11:59546000-59554400 Weak transcription Liver Liver
23 chr11:59546000-59554400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr11:59546000-59554400 Weak transcription Gastric stomach
25 chr11:59546000-59556600 Weak transcription Brain Angular Gyrus brain
26 chr11:59546000-59557800 Weak transcription Brain Anterior Caudate brain
27 chr11:59546000-59560800 Weak transcription Brain Cingulate Gyrus brain
28 chr11:59546400-59554600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr11:59546400-59568800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr11:59547000-59554400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr11:59547000-59554400 Weak transcription Pancreas Pancrea
32 chr11:59548200-59554400 Weak transcription Esophagus oesophagus
33 chr11:59548200-59554400 Weak transcription Left Ventricle heart
34 chr11:59548200-59554400 Weak transcription Ovary ovary
35 chr11:59548200-59554600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr11:59548200-59554800 Weak transcription Aorta Aorta
37 chr11:59548200-59555400 Weak transcription Primary B cells from cord blood blood
38 chr11:59548400-59556200 Weak transcription Primary hematopoietic stem cells blood
39 chr11:59550000-59554600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:59551400-59572800 Weak transcription Dnd41 blood
41 chr11:59551600-59554400 Weak transcription H1 Cell Line embryonic stem cell
42 chr11:59551600-59554600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr11:59551600-59573600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr11:59551600-59576600 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr11:59551600-59577200 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr11:59552000-59573000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr11:59552200-59554400 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr11:59552400-59555000 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr11:59552800-59555600 Genic enhancers Fetal Intestine Small intestine
50 chr11:59553000-59554400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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