Variant report

Variant rs2509730
Chromosome Location chr11:59556218-59556219
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59524400-59557000 Weak transcription Rectal Smooth Muscle rectum
2 chr11:59524600-59557400 Weak transcription Colon Smooth Muscle Colon
3 chr11:59524600-59573800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:59525600-59557800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr11:59534400-59559600 Weak transcription Fetal Brain Female brain
6 chr11:59534600-59571600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr11:59537600-59570400 Weak transcription Fetal Kidney kidney
8 chr11:59540800-59559600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr11:59541000-59560000 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr11:59541000-59573600 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr11:59541800-59559200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr11:59542200-59571400 Weak transcription Thymus Thymus
13 chr11:59542800-59557800 Weak transcription Fetal Stomach stomach
14 chr11:59543200-59557000 Weak transcription Primary T cells fromperipheralblood blood
15 chr11:59543200-59559200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:59544400-59573200 Weak transcription Psoas Muscle Psoas
17 chr11:59546000-59556600 Weak transcription Brain Angular Gyrus brain
18 chr11:59546000-59557800 Weak transcription Brain Anterior Caudate brain
19 chr11:59546000-59560800 Weak transcription Brain Cingulate Gyrus brain
20 chr11:59546400-59568800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr11:59551400-59572800 Weak transcription Dnd41 blood
22 chr11:59551600-59573600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr11:59551600-59576600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr11:59551600-59577200 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr11:59552000-59573000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr11:59553800-59556400 Genic enhancers Breast Myoepithelial Primary Cells Breast
27 chr11:59554200-59563600 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr11:59554200-59565200 Strong transcription Primary T cells from cord blood blood
29 chr11:59554200-59565600 Strong transcription iPS-18 Cell Line embryonic stem cell
30 chr11:59554200-59565600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr11:59554400-59565600 Strong transcription H1 Cell Line embryonic stem cell
32 chr11:59554400-59569000 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr11:59554600-59564800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr11:59554600-59565200 Strong transcription H9 Cell Line embryonic stem cell
35 chr11:59554600-59565800 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr11:59554600-59569000 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr11:59554800-59556800 Strong transcription Aorta Aorta
38 chr11:59554800-59557400 Weak transcription Brain Hippocampus Middle brain
39 chr11:59554800-59559200 Weak transcription Brain Inferior Temporal Lobe brain
40 chr11:59554800-59560400 Weak transcription Placenta Amnion Placenta Amnion
41 chr11:59554800-59564400 Strong transcription Spleen Spleen
42 chr11:59554800-59565800 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr11:59554800-59568800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:59554800-59576400 Strong transcription Primary monocytes fromperipheralblood blood
45 chr11:59554800-59576400 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr11:59555000-59556400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr11:59555000-59556800 Strong transcription Adipose Nuclei Adipose
48 chr11:59555000-59557000 Weak transcription Liver Liver
49 chr11:59555000-59557000 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr11:59555000-59557400 Weak transcription Skeletal Muscle Male skeletal muscle

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