Variant report

Variant	rs7144613
Chromosome Location	chr14:69101987-69101988
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69059806..69062420-chr14:69100843..69102617,2	MCF-7	breast:
2	chr14:69091753..69104091-chr14:69256141..69263760,20	MCF-7	breast:
3	chr14:69090615..69103406-chr14:69249821..69264188,29	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10131387	1.00[JPT][hapmap]
rs12895438	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17106102	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1884811	1.00[JPT][hapmap]
rs2024944	0.84[CEU][hapmap];1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs2064825	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2145155	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4899247	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4902623	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs4902624	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902625	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6573846	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6573847	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573848	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573849	0.85[CEU][hapmap];1.00[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs7148690	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7157140	1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs761951	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8009034	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8010030	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8010921	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8016840	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:91 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69092200-69107000	Enhancers	Fetal Muscle Leg	muscle
2	chr14:69093000-69104400	Enhancers	Fetal Lung	lung
3	chr14:69095200-69104200	Weak transcription	NH-A	brain
4	chr14:69095200-69104400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr14:69095600-69107400	Enhancers	Fetal Stomach	stomach
6	chr14:69095800-69104400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr14:69095800-69107800	Weak transcription	Fetal Brain Female	brain
8	chr14:69096200-69104000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr14:69096400-69102600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr14:69096400-69105400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr14:69096400-69105400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr14:69096800-69105000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr14:69097200-69104400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr14:69098000-69102000	Enhancers	Fetal Muscle Trunk	muscle
15	chr14:69098600-69104600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr14:69098800-69104200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr14:69098800-69105200	Weak transcription	Pancreas	Pancrea
18	chr14:69099400-69102000	Enhancers	Duodenum Smooth Muscle	Duodenum
19	chr14:69099600-69102000	Enhancers	Placenta Amnion	Placenta Amnion
20	chr14:69100600-69102000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr14:69100600-69104000	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr14:69100600-69104200	Weak transcription	Osteobl	bone
23	chr14:69100800-69102400	Weak transcription	K562	blood
24	chr14:69100800-69104200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr14:69100800-69104400	Weak transcription	Ovary	ovary
26	chr14:69100800-69104400	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr14:69100800-69105400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
28	chr14:69100800-69105400	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr14:69100800-69107000	Weak transcription	Small Intestine	intestine
30	chr14:69100800-69107800	Weak transcription	Primary B cells from cord blood	blood
31	chr14:69101000-69102600	Weak transcription	Rectal Smooth Muscle	rectum
32	chr14:69101000-69102800	Weak transcription	Fetal Intestine Small	intestine
33	chr14:69101000-69102800	Weak transcription	HepG2	liver
34	chr14:69101000-69103400	Weak transcription	Primary T cells from cord blood	blood
35	chr14:69101000-69103400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr14:69101000-69103400	Weak transcription	Fetal Intestine Large	intestine
37	chr14:69101000-69103400	Weak transcription	NHLF	lung
38	chr14:69101000-69104000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr14:69101000-69104000	Weak transcription	NHDF-Ad	bronchial
40	chr14:69101000-69104200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr14:69101000-69104200	Weak transcription	Duodenum Mucosa	Duodenum
42	chr14:69101000-69104200	Weak transcription	HMEC	breast
43	chr14:69101000-69104400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr14:69101000-69104400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr14:69101000-69104600	Weak transcription	Stomach Mucosa	stomach
46	chr14:69101000-69104800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr14:69101000-69105000	Weak transcription	Primary B cells from peripheral blood	blood
48	chr14:69101000-69105200	Weak transcription	Primary hematopoietic stem cells	blood
49	chr14:69101000-69105200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr14:69101200-69102600	Weak transcription	Colon Smooth Muscle	Colon

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