Variant report

Variant	rs71495633
Chromosome Location	chr10:62029934-62029935
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62028565..62031361-chr10:62037925..62040618,2	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11592290	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11815139	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12769536	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12770090	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12780261	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12781443	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12782314	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12782806	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12783491	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17233781	0.82[AMR][1000 genomes]
rs17233871	0.82[AMR][1000 genomes]
rs35098882	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35175163	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35305500	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6479707	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090893	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7095717	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs71495632	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495634	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs71495635	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7900123	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62007000-62040600	Weak transcription	HSMMtube	muscle
2	chr10:62014400-62037400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr10:62014800-62031000	Weak transcription	Primary B cells from peripheral blood	blood
4	chr10:62015000-62041800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr10:62015200-62034000	Weak transcription	Small Intestine	intestine
6	chr10:62018000-62038600	Weak transcription	Fetal Lung	lung
7	chr10:62018600-62038400	Weak transcription	Duodenum Mucosa	Duodenum
8	chr10:62019200-62040800	Weak transcription	Fetal Brain Male	brain
9	chr10:62021000-62037400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
10	chr10:62021600-62038200	Weak transcription	Ovary	ovary
11	chr10:62022000-62031000	Weak transcription	Fetal Muscle Trunk	muscle
12	chr10:62022400-62040600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr10:62023200-62040400	Weak transcription	Brain Substantia Nigra	brain
14	chr10:62023200-62041200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr10:62023200-62043800	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr10:62023200-62053400	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr10:62023400-62036200	Weak transcription	Brain Anterior Caudate	brain
18	chr10:62023600-62037400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr10:62023600-62038400	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr10:62023600-62040600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
21	chr10:62023600-62041000	Weak transcription	Brain Cingulate Gyrus	brain
22	chr10:62023600-62041200	Weak transcription	Skeletal Muscle Female	skeletal muscle
23	chr10:62023800-62034200	Weak transcription	Primary T helper cells fromperipheralblood	blood
24	chr10:62023800-62036200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr10:62023800-62036200	Weak transcription	Brain Angular Gyrus	brain
26	chr10:62023800-62036600	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chr10:62023800-62037400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr10:62023800-62038400	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr10:62023800-62038600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
30	chr10:62023800-62040000	Weak transcription	Fetal Intestine Small	intestine
31	chr10:62023800-62040200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr10:62023800-62040200	Weak transcription	Fetal Intestine Large	intestine
33	chr10:62023800-62040400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
34	chr10:62023800-62040400	Weak transcription	Brain Inferior Temporal Lobe	brain
35	chr10:62023800-62040400	Weak transcription	Rectal Mucosa Donor 29	rectum
36	chr10:62023800-62040800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr10:62023800-62040800	Weak transcription	Lung	lung
38	chr10:62023800-62041000	Weak transcription	Spleen	Spleen
39	chr10:62023800-62042000	Weak transcription	Esophagus	oesophagus
40	chr10:62023800-62043800	Weak transcription	Right Ventricle	heart
41	chr10:62023800-62048000	Weak transcription	Fetal Stomach	stomach
42	chr10:62023800-62051600	Weak transcription	Pancreas	Pancrea
43	chr10:62023800-62055800	Weak transcription	Gastric	stomach
44	chr10:62024000-62040200	Weak transcription	Primary T cells from cord blood	blood
45	chr10:62026600-62040600	Weak transcription	Brain Hippocampus Middle	brain
46	chr10:62027400-62059800	Weak transcription	Psoas Muscle	Psoas
47	chr10:62028000-62033600	Weak transcription	Left Ventricle	heart
48	chr10:62028000-62040800	Weak transcription	Right Atrium	heart
49	chr10:62029000-62031400	Weak transcription	Fetal Heart	heart
50	chr10:62029800-62030600	Enhancers	HSMM	muscle

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